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. 2014 Mar 25;5(1):1–9. doi: 10.1080/21501203.2014.899525

Table 1.

Microsatellites in the genome of C. albicans that have been characterized for strain typing of the species.

Locus Chromosome Repetitive motif Primer sequence (5′→3′)
CDC3 1 (AGTA)n Fwd CAGATGATTTTTTGTATGAGAAGAA
Rev CAGTCACAAGATTAAAATGTTCAAG
EF3 5 (TTTC)n(TTC)n Fwd TTTCCTCTTCCTTTCATATAGAA
Rev GGATTCACTAGCAGCAGACA
HIS3 2 (ATTT)n Fwd TGGCAAAAATGATATTCCAA
Rev TACACTATGCCCCAAACACA
ERK1 (CAGGCT)n(CAAGCT)n(CAA)n Fwd CGACCACGTCATCAATAGAAATCG
(GCCGCA)n(CTT)n Rev CGTTGAATGAAACTTGACGAGGGG
CAI 4 (CAA)2CTG(CAA)n(CAG)n Fwd ATGCCATTGAGTGGAATTGG
Rev AGTGGCTTGTGTTGGGTTTT
CAIII 5 (GAA)n Fwd TTGGAATCACTTCACCAGGA
Rev TTTCCGTGGCATCAGTATCA
CAIV (ATT)n Fwd TGCCAAATCTTGAGATACAAGTG
Rev CTTGCTTCTCTTGCTTTAAATTG
CAV 3 (ATT)n Fwd TGCCAAATCTTGAGATACAAGTG
Rev CTTGCTTCTCTTGCTTTAAATTG
CAVI 2 (TAAA)n Fwd ACAATTAAAGAAATGGATTTTAGTCAG
Rev TGCTGGTGCTGCTGGTATTA
CAVII 1 (CAAAT)n Fwd GGGGATAGAAATGGCATCAA
Rev TGTGAAACAATTCTCTCCTTGC