Table 9. Water Bridge Occupancies for 1–9 Obtained from HREX Simulationsa.
compound | O5···O6 | O6···O5′ | O5···O5′ | O5···O2′ | O5···HO2′ | O6···O2′ | HO4···O2′ | O6···O=C |
---|---|---|---|---|---|---|---|---|
1 | 0.25 | 0.00 | ||||||
2 | 0.30 | 0.18 | 0.08 | 0.15 | ||||
3 | 0.41 | 0.19 | 0.11 | 0.16 | 0.17 | 0.11 | ||
4 | 0.29 | 0.00 | 0.26 | 0.25 | 0.22 | |||
5 | 0.32 | 0.18 | 0.11 | 0.13 | 0.14 | 0.11 | ||
6 | 0.00 | 0.15 | ||||||
7 | 0.18 | 0.02 | 0.11 | |||||
8 | 0.26 | 0.15 | 0.11 | 0.14 | ||||
9 | 0.26 | 0.00 | 0.22 | 0.17 | 0.24 |
H-bond occupancies of >0.08 are shown. The BRIDge option in CHARMM was used for calculating the average number of water bridges formed between selected pairs of atoms.