Table 1.
Primers | Primer sequences | Product size (bp) | Annealing temperature |
---|---|---|---|
RT-PCR | |||
CYB5R2- forward | 5′-CCTTGTAGGGACCCGTCCC-3′ | 291 | 66 °C |
CYB5R2- reverse | 5′-GACAGGGGTGTAAGCCCTG-3′ | ||
GAPDH-forward | 5′-AAGCTCACTGGCATGGCCTT-3′ | 375 | 60 °C |
GAPDH-reverse | 5′-CTCTCTTCCTCTTGTGCTCTTG-3′ | ||
Methylation-specific PCR | |||
MSP-forward | 5′-GGGGAGCGGGTTAGTCGTC-3′ | 140 | 65 °C |
MSP-reverse | 5′-GAACCCGCAAACTCGTAACGTC-3′ | ||
USP-forward | 5′-GGGGAGTGGGTTAGTTGTTG-3′ | 146 | 58 °C |
USP-reverse | 5′-CACCACAAACCCACAAACTC-3′ | ||
Bisulfite sequencing PCR | |||
BGS-forward | 5′-GGTAGGGTTGATTTAGAGTTAG-3′ | 301 | 58 °C |
BGS-Reverse | 5′-CTTCAATACTCCATAAATACACC-3′ |