Table 2.
Detailed information for reference genomes and real-life short-read datasets from Illumina sequencing platform.
| Genome | Reads ID | Reads length (bp) | Read count | Genome size | Genome version (ID) |
|---|---|---|---|---|---|
| PhiX | ERR007488 | 36 | 4516934 | <1 Mbp | NC_001422.1 (NCBI) |
| E. coli | SRR023978 | 51 | 9575373 | 5 Mbp | NC_000913.2 (NCBI) |
| S. cerevisiae | SRX011891 | 36 | 10995605 | 12 Mbp | sacCer2 (UCSC) |
| D. melanogaster | SRR001815 | 36 | 10760364 | 172 Mbp | dm3 (UCSC) |
| Oryza sativa | DRR000023 | 32 | 18443432 | 388 Mbp | NCBI |
| Homo sapiens | SRR037152 | 35 | 4761769 | 3263 Mbp | hg18 (UCSC) |
| Homo sapiens | SRX003935 | 32 | 18424533 | 3263 Mbp | hg18 (UCSC) |