Table 2.
No. of samples detected |
Mean (Std) Raw Ct |
Mean (Std) ΔCt* |
||||||
---|---|---|---|---|---|---|---|---|
miRNA | LR | CRPC | LR | CRPC | LR | CRPC | Fold** change |
p-value |
hsa-miR-375 | 26 | 25 | 26.3(1.7) | 24.2(2.1) | 5.4(2.3) | 2.4 (2.5) | +8.0 | <0.0001 |
hsa-miR-96 | 2 | 4 | 33.5(1.1) | 31.9(1.0) | 15.1(0.6) | 9.6(1.0) | +45.3 | 0.0022 |
hsa-miR-892b | 8 | 8 | 34.9(1.1) | 34.3(1.1) | 15(1.7) | 11.7(2.2) | +9.9 | 0.004 |
hsa-miR-378* | 15 | 13 | 31.8(2.2) | 30.7(2.4) | 11.3(2.8) | 8.1(2.8) | +9.2 | 0.0057 |
hsa-miR-302b | 5 | 4 | 33.1(2.7) | 28.8(0.2) | 12.9(3.6) | 7.4(0.2) | +45.3 | 0.0192 |
hsa-miR-548c-3p | 28 | 25 | 31.6(1.9) | 31.9(1.6) | 11.4(2.5) | 9.9(1.7) | +2.8 | 0.0216 |
hsa-miR-124 | 4 | 4 | 32.3(1.5) | 33.3(1.3) | 13.5(1.3) | 11.3(0.8) | +4.6 | 0.025 |
hsa-miR-141 | 16 | 18 | 31.7(2.5) | 30.2(2.1) | 10.6(4.0) | 7.9(2.6) | +6.5 | 0.0276 |
hsa-miR-875-5p | 24 | 20 | 34.1(3.2) | 32.9(2.3) | 13(3.2) | 10.8(3.3) | +4.6 | 0.0287 |
hsa-miR-409-3p | 27 | 24 | 28.6(3.6) | 32.0(3.4) | 7.5(5.1) | 10.3(3.7) | −7.0 | 0.0297 |
hsa-miR-548a-3p | 28 | 25 | 31.6(2.0) | 31.1(1.1) | 10.7(2.8) | 9.2(1.7) | +2.8 | 0.0302 |
hsa-miR-623 | 13 | 15 | 33.8(2.1) | 35.6(1.4) | 12.9(2.0) | 14.3(1.4) | −2.6 | 0.0362 |
hsa-miR-520d-5p | 28 | 26 | 27.9(2.1) | 27.5(1.7) | 6.9(2.6) | 5.6(1.9) | +2.5 | 0.0414 |
hsa-miR-489 | 8 | 8 | 33.7(3.3) | 32.6(2.5) | 13.6(3.1) | 10.7(2.3) | +7.5 | 0.0466 |
normalized by subtracting the Ct value of U6(reference) from the Ct value of each miRNA
calculated as the relative value 2 −(ΔCT (group1) −ΔCT (group2))
Out of 669 miRNAs probed, the relative expression levels of 12 miRNAs were up-regulated (designated by (+) in fold change) in CRPC patient serum samples in comparison to the levels found in low-risk patient serum samples, while the expression level of two miRNAs were down-regulated (designated by the (−) in fold change). Bolded miRNAs were selected for further study. P-values were calculated based on the unpaired two-sided t-test, with a cut-point of 0.05.