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. Author manuscript; available in PMC: 2014 Apr 10.
Published in final edited form as: Biochemistry. 2012 Oct 29;51(44):8829–8843. doi: 10.1021/bi300783t

Figure 3.

Figure 3

Mutated and probe regions that were used in the FEP and LIE simulations, respectively. The atoms shown in black were included in both FEP and LIE regions. The regions mutated in the FEP simulations included additionally -CH2- group(s) and the glycine fragment -G- (NHCHCO) of each amino acid residue (red).