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. 2014 Apr 10;9(4):e93758. doi: 10.1371/journal.pone.0093758

Table 5. Specificity of AHSV virus-species-specific assays (Seg-1 and Seg-3).

Virus species-serotype Origin ORC reference number Ct values
Seg-1 Seg-3
Reference strain AHSV-1 RSA RSArah1/03 17.36 19.13
Reference strain AHSV-2 RSA RSArah2/03 16.56 16.02
Reference strain AHSV-3 RSA RSArah3/03 21.1 22.02
Reference strain AHSV-4 RSA SPArah4/03 14.37 16.09
Reference strain AHSV-5 RSA RSArah5/03 19.02 20.52
Reference strain AHSV-6 RSA RSArah6/03 20.00 19.81
Reference strain AHSV-7 Kenya KENrah7/03 17.22 16.17
Reference strain AHSV-8 RSA RSArah8/03 17.08 16.41
Reference strain AHSV-9 Pakistan PAKrah9/03 16.73 12.63
EEV-1 RSA RSA1967/03 No Ct No Ct
EEV-2 RSA RSA1971/06 No Ct No Ct
EEV-3 RSA RSA1974/06 No Ct No Ct
EEV-4 RSA RSA1976/03 No Ct No Ct
EEV-5 RSA RSA1976/06 No Ct No Ct
EEV-6 RSA RSA1991/03 No Ct No Ct
PHSV Peru PER1997/01 No Ct No Ct
EHDV-1 USA USA2001/03 No Ct No Ct
EHDV-5 Australia AUS1977/01 No Ct No Ct
EHDV-7 Australia AUS1981/06 No Ct No Ct
EHDV-7 Israel ISR2006/01 No Ct No Ct
BTV-16 Pakistan RSArrrr/16 No Ct No Ct
BTV-2 India IND1982/01 No Ct No Ct
BTV-9 Turkey TUR1998/04 No Ct No Ct
BTV-8 UK UKG2007/64 No Ct No Ct
BTV-1 RSA RSArrrr/01 No Ct No Ct
BTV-12 RSA RSArrrr/12 No Ct No Ct
C. sonorensis No Ct No Ct
Uninfected BHK cells No Ct No Ct
Uninfected Vero cells No Ct No Ct
Uninfected KC cells No Ct No Ct
Uninfected horse blood No Ct No Ct

Representatives of different serotypes and topotypes from five different Orbivirus species (AHSV, EEV, PHSV, EHDV and BTV) were tested to confirm the specificity of assays for AHSV dsRNA. Further details on these isolates can be obtained from ORC http://www.reoviridae.org/dsRNA_virus_proteins/ReoID/viruses-at-iah.htm [61]. EEV  =  Equine encephalosis virus; PHSV  =  Peruvian horse sickness virus; EHDV  =  Epizootic haemorrhagic disease virus; BTV  =  Bluetongue virus. RSA  =  Republic of South Africa.