Table 3. Comparison of annotations for SLFN5 gene locus.
Primary annotation | Chr | Start (bp) | End (bp) | Strand | Coverage (bp) |
RefSeq: SLFN5 (NM_144975) | 17 | 33,570,086 | 33,594,768 | + | 24,682 |
ensembl: ENST00000299977 | 17 | 33,570,055 | 33,600,674 | + | 30,619 |
ensembl: ENST00000542451 | 17 | 33,570,090 | 33,593,379 | + | 23,289 |
ensembl: ENST00000299977 | 17 | 33,570,108 | 33,586,839 | + | 16,731 |
Proposed re-annotation 1 | |||||
RNA-seq: 5′ UTR | 17 | 33,570,055 | 33,585,708 | + | 15,653 |
RNA-seq: SLFN5 | 17 | 33,585,709 | 33,592,121 | + | 6,412 |
RNA-seq/DRS: 3′ UTR | 17 | 33,592,121 | 33,597,113 | + | 4,992 |
Summary | 17 | 33,570,055 | 33,597,113 | + | 27,057 |
Proposed re-annotation 2 | |||||
RNA-seq: 5′ UTR | 17 | 33,570,055 | 33,585,708 | + | 15,653 |
RNA-seq: SLFN5 | 17 | 33,585,709 | 33,592,121 | + | 6,412 |
RNA-seq/DRS: 3′ UTR | 17 | 33,592,121 | 33,600,669 | + | 8,548 |
Summary | 17 | 33,570,055 | 33,600,669 | + | 30,613 |