Table 7. Transcript annotations for RPL31 gene locus.
Primary annotation | Chr | Start (bp) | End (bp) | Strand | Coverage (bp) |
RefSeq: RPL31 NM_001098577.2 | 2 | 101,618,690 | 101,636,154 | + | 17,464 |
RefSeq: RPL31 NM_001099693.1 | 2 | 101,618,690 | 101,622,884 | + | 4,194 |
RefSeq: RPL31 NM_000993.4 | 2 | 101,618,690 | 101,622,884 | + | 4,194 |
ensembl: ENST00000264258 | 2 | 101,618,177 | 101,623,729 | + | 5,612 |
ensembl: ENST00000409320 | 2 | 101,618,755 | 101,622,880 | + | 4,125 |
ensembl: ENST00000409711 | 2 | 101,619,153 | 101,622,829 | + | 3,676 |
ensembl: ENST00000456292 | 2 | 101,619,153 | 101,622,533 | + | 3,380 |
ensembl: ENST00000409000 | 2 | 101,618,691 | 101,621,066 | + | 2,375 |
ensembl: ENST00000409028 | 2 | 101,618,745 | 101,636,078 | + | 17,333 |
ensembl: ENST00000409650 | 2 | 101,618,755 | 101,634,751 | + | 15,996 |
ensembl: ENST00000409038 | 2 | 101,618,755 | 101,634,768 | + | 16,013 |
ensembl: ENST00000409733 | 2 | 101,618,755 | 101,622,881 | + | 4,126 |
ensembl: ENST00000441435 | 2 | 101,619,201 | 101,640,494 | + | 21,293 |
ensembl: ENST00000419276 | 2 | 101,618,773 | 101,622,885 | + | 4,152 |
Proposed re-annotation 1 | |||||
RNA-seq: 5′ UTR | 2 | 101,618,690 | 101,619,162 | + | 472 |
RNA-seq: RPL31 | 2 | 101,619,163 | 101,622,842 | + | 3,679 |
RNA-seq/DRS: 3′ UTR 1 | 2 | 101,622,843 | 101,622,865–101,622,887 | + | 22–44 |
Summary | 2 | 101,618,690 | 101,622,865–101,622,887 | + | 4,175–4,197 |
Proposed re-annotation 2 | |||||
RNA-seq: 5′ UTR | 2 | 101,618,690 | 101,619,162 | + | 472 |
RNA-seq: RPL31 | 2 | 101,619,163 | 101,635,499 | + | 3,679 |
RNA-seq/DRS: 3′ UTR 1 | 2 | 101,635,500 | 101,636,201 | + | 22–44 |
Summary | 2 | 101,618,690 | 101,636,201 | + | 4,175–4,197 |
Proposed re-annotation 3 | |||||
RNA-seq: 5′ UTR | - | - | - | - | |
RNA-seq: RPL31 | 2 | 101,619,201 | 101,640,097 | 20,896 | |
RNA-seq/DRS: 3′ UTR 1 | 2 | 101,640,098 | 101,640,488 | 390 | |
Summary | 2 | 101,619,201 | 101,640,488 | 21,287 | |
Primary annotation | |||||
RefSeq: TBC1D8 | 2 | 101,623,690 | 101,767,846 | - | 4,163 |
Ensembl: ENST00000409318 | 2 | 101,624,079 | 101,767,846 | - | 3,803 |
Proposed re-annotation | |||||
RNA-seq: 3′ UTR | 2 | 101,622,395 | 101,624,281 | - | 1,886 |
RNA-seq: TBC1D8 | 2 | 101,624,282 | 101,767,714 | - | 143,432 |
RNA-seq/DRS: 5′ UTR | 2 | 101,767,715 | 101,767,730 | - | 15 |