Table 2.
Host strains used in this study (RCC = Roscoff Culture Collection)
| Host species | Clade | Strain code in RCC | Alternative strain code (other culture collections) | Isolation site | Isolation date (dd-mm-yyyy) | Reference and/or accession number |
|---|---|---|---|---|---|---|
| Mp |
A |
2485 |
|
Atlantic Ocean |
11-07-1980 |
This study, KF501024 |
| |
(38°42'N, 72°22'W) |
|
||||
| Mp |
A |
658 |
CS-170 |
Pacific Ocean, West Australia |
01-01-1982 |
This study, KF501030 |
| Mp |
B |
2482 |
|
Mediterranean Sea, Italy |
08-04-1993 |
This study, KF501032 |
| Mp |
B |
2483 |
|
Mediterranean Sea, Italy |
08-01-1997 |
This study, KF501033 |
| Mp |
B |
418 |
|
English Channel |
14-06-2001 |
This study, KF501026 |
| |
(48°37'N, 3°51'W) |
|
||||
| Mp |
B |
461 |
|
English Channel |
14-06-2001 |
This study, KF501027 |
| |
(48°37'N, 3°51'W) |
|
||||
| Mp |
B |
1109 |
|
Mediterranean Sea, Leucate lagoon |
28-07-2006 |
This study, KF501031 |
| |
(42°48'N, 3°1'E) |
|
||||
| Mp |
C |
2484 |
|
Mediterranean Sea, Spain |
18-04-2002 |
This study, KF501034 |
| |
(41°43'N, 3°33'E) |
|
||||
| Mp |
C |
834 |
CCMP1545, PLY 27 |
English Channel |
13-04-1950 |
[28]; AY954994 |
| |
(50°36'N, 3°57'W) |
|
||||
| Mp |
C |
629 |
|
North Sea, Germany |
17-01-2001 |
This study, KF501018 |
| |
(54°11'N, 7°54'E) |
|
||||
| Mp |
C |
465 |
|
English Channel |
13-06-2001 |
This study, KF501028 |
| |
(48°37'N, 4°17'W) |
|
||||
| Mp |
C |
373 |
|
Baltic Sea, Skagerrak |
03-01-2001 |
This study, KF501025 |
| |
(58°11'N, 9°6'E) |
|
||||
| Mp |
C |
114 |
CCMP490 |
Atlantic Ocean, USA |
18-06-1964 |
[22], AY955004 |
| |
(41°31'N, 70°40'W) |
|
||||
| Ot |
C |
745 |
|
Mediterranean Sea, Thau lagoon |
03-05-1995 |
[19], CAID01000012 |
| |
(43°24'N, 3°36'E) |
|
||||
| Ol |
A |
|
CCE9901, CCMP2972 |
North Pacific, California |
01-01-1999 |
[20], AY329636 |
| |
(32°90'N, 117°25'W) |
|
||||
| O |
A |
344 |
|
English Channel |
04-12-2000 |
[16], AY425307 (18S);
[17], AY586736 (ITS) |
| |
(48°45′N, 3°57′W) |
|
||||
| O |
A |
356 |
|
North Atlantic, Morocco |
09-12-1999 |
[16], AY425308 (18S);
[17], AY586740 (ITS) |
| |
(30°8'N, 10°3'W) |
|
||||
| O |
C |
1108 |
|
Mediterranean Sea, Banyuls Bay |
01-02-2006 |
[18]; GQ426332 |
| |
(42°29'N, 3°8'E) |
|
||||
| Om |
D |
789 |
|
Mediterranean Sea, Spain |
28-02-2001 |
[16], AY425313 (18S); This study,
[17], AY586745 (ITS) |
| |
(41°43'N, 3°33'E) |
|
||||
| Om |
D |
1107 |
|
Mediterranean Sea, (43°3'N, 2°59'E) |
01-01-2006 |
[21], JN862902 |
| Bp |
|
1105 |
|
Mediterranean Sea, Banyuls Bay |
01-01-2006 |
[29], JX625115 |
| |
(42°29'N, 3°8'E) |
|
||||
| Bp |
|
464 |
|
English Channel |
09-07-2000 |
This study, KF501036 |
| (48°45'N, 3°57'W) | ||||||
Mp = Micromonas pusilla, Ot = Ostreococcus tauri, O = Ostreococcus sp, Ol = Ostreococcus lucimarinus, Om = Ostreococcus mediterraneus, Bp = Bathycoccus prasinos. RCC2482, 2483, 2484 and 2485 are clonal strains isolated from RCC828, RCC829, RCC497 and RCC 451, respectively.