Table 3.
Data on virus strains used in this study (RCC: Roscoff Culture Collection)
| Strain name in RCC | Original strain name | Isolation date (dd-mm-yyyy) | Isolation site | Reference and/or accession number |
|---|---|---|---|---|
| 2066 |
MicAV27 |
10-11-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378571 |
| 2067 |
MicAV28 |
10-11-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500985 |
| 2068 |
MicAV29 |
10-11-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378572 |
| 2069 |
MicAV30 |
10-11-2009 |
Ilot St-Anne (48°41'17''N, 3°57'27''W) |
[8], KF378573 |
| 2070 |
MicAV31 |
11-11-2009 |
Ilot St-Anne (48°41'17''N, 3°57'27''W) |
This study, KF500986 |
| 2071 |
MicAV32 |
11-11-2009 |
Ilot St-Anne (48°41'17''N, 3°57'27''W) |
This study, KF500987 |
| 2073 |
MicAV34 |
12-11-2009 |
Ilot St-Anne (48°41'17''N, 3°57'27''W) |
This study, KF500988 |
| 2075 |
MicAV38 |
12-10-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500989 |
| 2076 |
MicAV39 |
12-10-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500990 |
| 2082 |
MicBV13 |
20-03-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500993 |
| 2085 |
MicBV16 |
20-03-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500994 |
| 2093 |
MicBV25 |
18-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500995 |
| 2094 |
MicBV26 |
18-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378576 |
| 2099 |
MicBV39 |
16-04-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378578 |
| 2100 |
MicBV40 |
16-04-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500996 |
| 2199 |
MicB1109V4 |
28-09-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500991 |
| |
MicB1109V6 |
28-09-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500992 |
| 2206 |
MicB1109V14 |
28-09-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378564 |
| 2125 |
MicCV1 |
05-02-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500997 |
| 2126 |
MicCV2 |
05-02-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500998 |
| 2127 |
MicCV3 |
05-02-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF500999 |
| 2131 |
MicCV9 |
03-04-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378580 |
| 2132 |
MicCV10 |
03-04-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501000 |
| 2135 |
MicCV21 |
04-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501001 |
| 2136 |
MicCV22 |
04-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501002 |
| 2137 |
MicCV23 |
04-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501003 |
| 2142 |
MicCV28 |
18-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501004 |
| 2146 |
MicCV32 |
02-06-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378579 |
| 2150 |
MicCV36 |
14-08-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
This study, KF501005 |
| 2167 |
MicC497V1 |
18-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378567 |
| 2168 |
MicC497V2 |
18-05-2009 |
SOMLIT-Astan (48°46' 18'' N, 3°58' 6''W) |
[8], KF378566 |
| |
OlV158 |
01-16-2008 |
Mediterranean Sea, Leucate lagoon (42°48'N, 3°1''E) |
[27], GQ412099 |
| |
OlV349 |
09-26-2008 |
English Channel (48°45'N, 3°57'W) |
[27], GQ412082 |
| |
OlV360 |
10-30-2008 |
South Pacific, Chili (36°32'S, 72°56'W) |
[27], GQ412085 |
| |
OlV462 |
09-26-2008 |
Mediterranean Sea, Banyuls Bay (42°29'N, 3°8'E) |
[27], GQ412091 |
| |
OlV536 |
10-20-2008 |
English Channel (48°45'N, 3°57'W) |
[27], GQ412096 |
| |
OtV3 |
01-24-2006 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
[13], FJ267504 |
| |
OtV4 |
01-24-2006 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
This study, KF501006 |
| |
OtV9 |
13-02-2006 |
Mediterranean Sea, Thau lagoon (43°24'N, 03°36'E) |
[30], JN225859 |
| |
OtV22 |
04-20-2006 |
Mediterranean Sea, Bages lagoon |
[13], FJ267497 |
| |
OtV304 |
08-06-2008 |
Mediterranean Sea, Leucate lagoon (42°48'N, 3°1'E) |
This study, KF501007 |
| |
OtV343 |
09-26-2008 |
Mediterranean Sea, Banyuls Bay (42°29'N, 3°8'E) |
This study, KF501008 |
| |
OtV344 |
09-26-2008 |
Mediterranean Sea, Banyuls Bay (42°29'N, 3°8'E) |
This study, KF501009 |
| |
OtV564 |
27-03-2009 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
This study, KF501010 |
| |
OtV565 |
27-03-2009 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
This study, KF501011 |
| |
OtV573 |
27-03-2009 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
This study, KF501012 |
| |
OmV63 |
01-31-2007 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
[13], FJ267501 |
| |
OmV64 |
01-31-2007 |
Mediterranean Sea, La Palme lagoon (42°57'18.04''N, 3°0'3.56''E) |
[13], FJ267502 |
| |
OmV67 |
06-01-2007 |
Mediterranean Sea, Leucate lagoon (42°48'N, 3°1'E) |
[13], FJ267500 |
| |
BpV1 |
10-31-2007 |
Mediterranean Sea, Banyuls Bay (42°27'N, 3°32'E) |
[11], NC_014765 |
| 2211 | BatV3 | 04-04-2009 | English Channel (48°37'N, 4°17'W) | This study, KF501013 |