Table 7.
Hits identified as reliable using the PPM algorithm.
| Gen | Enzyme [organism] | PPM ident. | Closest related protein (sequence identity) [organism] |
|---|---|---|---|
| AF_D | ADH [MSBL1] | Pat 1 | ADH, iron-containing (60%) [Thermotoga neapolitana DSM 4359] |
| HD_K | 2-Hydroxyacid DH [USMBL6] | Pat 3 | NAD-binding 2-hydroxyacid DH (63%) [Petrotoga mobilis SJ95] |
| HP_D | Halolysin [MSBL1] | Pat 8-10 | Peptidase S8 (53%) [Haladaptatus paucihalophilus] |
| SP_A | Subtilisin [MBGE] | Peptidase S8 (50%) [Bacillus sp. SG-1] | |
| PD_A | Prephenate DH [MBGE] | Pro 1 | Prephenate dehydrogenase (48) [Methanobacterium formicicum] |
| DR_A1 | DHPR [MSBL1] | PP 1 | DHPR (56%) [Methanobacterium sp. SWAN-1] |
| DR_A2 | DHPR [MBGE] | DHPR (57%) [Methanocaldococcus vulcanius M7] | |
| DR_D | DHPR [MSBL1] | DHPR (54%) [Methanobacterium sp. SWAN-1] | |
| DR_K | DHPR [MSBL1] | DHPR (53%) [Methanobacterium sp. SWAN-1] | |
| CA_A | γ-CA [MSBL1] | Manual PPM | Ferripyochelin binding protein (fbp, 43%) [Thermosediminibacter oceani DSM 16646] |
| CA_D | γ-CA [MSBL1] | Hypothetical protein (53%) [Corynebacterium pyruviciproducens] |
Last letter of gene name indicates habitat: D, Discovery; A, Atlantis II; K, Kebrit.