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. Author manuscript; available in PMC: 2014 Aug 20.
Published in final edited form as: Nature. 2014 Feb 20;506(7488):364–366. doi: 10.1038/nature12977

Figure 3. Viral strain relations.

Figure 3

RNA-dependent RNA polymerase (RdRp) partial gene phylogeny of pollinator viruses (main text). Gene trees were estimated using PhyML v.3.0 maximum-likelihood (ML) bootstrapping (500 replicates) and MrBayes v3.1.2 (see Methods). Coloured boxes correspond to sites H, L, Q, R and X (as shown on the map) while text colours correspond to host (Red: Bombus; Black: Apis). Symbols represent node support values: posterior probability (left), bootstrap support (right). Filled circle: >90%, Target symbol: >70%, Empty circle: >50%. Branches (//) one third of true length.