Table 4. Prediction Accuracy of Destabilizing/Stabilizing Mutations and Binding Hot Spots for Single Mutations.
destabilizing | stabilizing |
binding
hot spot |
||||
---|---|---|---|---|---|---|
method | training/test set | accuracy | accuracy | accuracy | sensitivity | specificity |
Pred2 | SKEMPI/SKEMPI | 0.95 | 0.11 | 0.80 | 0.51 | 0.91 |
SKEMPI/NM | 1.00 | 0.07 | 0.81 | 0.64 | 0.87 | |
CC/PBSA | NM/NM | 0.99 | 0.32 | 0.84 | 0.48 | 0.97 |
FoldX | test: NM | 0.72 | 0.48 | 0.77 | 0.37 | 0.91 |
test: SKEMPI | 0.67 | 0.41 | 0.76 | 0.30 | 0.94 | |
BeAtMuSiC | test: NM | 0.95 | 0.23 | 0.77 | 0.33 | 0.92 |
test: SKEMPI | 0.90 | 0.18 | 0.77 | 0.30 | 0.95 |