Table 3. Clusters of ST_ kinases, PKc-like proteins and HTH-Xre players show altered expression during phase variation.
A. Genes differentially regulated in two or more tan strains | |||||
Fold change | |||||
MXAN ID | Description | WT-T | asgB | dkxG | xre228 |
1233 | serine-threonine kinase | +2 | +3 | −3 | +1 |
1234 | protein kinase-like (PKc-like) | −41 | −55 | −1 | −12 |
1668 | serine-threonine kinase associated protein KapC | −8 | −16 | +2 | +2 |
2177 | protein kinase-like (PKc-like) | −35 | −62 | +1 | −24 |
2399 | serine-threonine kinase | +11 | +4 | −1 | +5 |
2840 | serine-threonine kinase | +57 | +32 | −1 | +1 |
3183 | protein kinase like (PKc-like) | −37 | −60 | +1 | −20 |
4371 | serine-threonine kinase | +132 | +293 | −3 | −15 |
4372 | HTH-Xre DNA-binding protein | +96 | +337 | −1 | −3 |
4373 | serine-threonine kinase | +9 | +9 | 1 | −1 |
4479 | serine-threonine kinase like | +43 | +42 | −5 | −6 |
4480 | HTH- Xre DNA-binding protein | +26 | +51 | −1 | −1 |
4481 | HTH- Xre DNA-binding protein | +31 | +50 | +1 | −2 |
4841 | protein kinase like (PKc-like) | −46 | −72 | +1 | −17 |
6998 | HTH- Xre DNA-binding protein | +109 | +125 | +2 | +1 |
7370 | serine-threonine kinase | +187 | +293 | +2 | +2 |
7371 | serine-threonine kinase | +99 | +116 | +10 | +20 |
Legend: A description of the microarray is provided in Table 1 legend. Column headings: ID = MXAN # and description refers to annotation; both are derived from the M. xanthus genome [43]; fold change represents the increase or decrease in expression and is derived from coefficient value. + = increased expression; - = decreased expression.