Table 3.
Selected differentially expressed genes in QPX exposed to four temperature treatments
|
Sequence description |
Mean fold changed |
Seq. ID number |
Top BLAST Hit |
||||
|---|---|---|---|---|---|---|---|
| 27°C | 23°C | 13°C | 10°C | Accession no. | E-value | ||
|
Protein stability |
|
|
|
|
|
|
|
| dnaj protein 1 |
-1.5 |
-1.6 |
1.4 |
1.2 |
qpx_c101 |
XP_002287676 |
4.13E-06 |
| dnaj protein 2 |
-1.3 |
-2.3 |
1.4 |
1.5 |
qpx_c9231 |
XP_002505603 |
7.23E-23 |
| dnaj protein 3 |
-2.1 |
-1.9 |
1.5 |
1.6 |
qpx_c11973 |
EGZ29544 |
1.71E-06 |
| Heat shock protein 40 kDa |
-2.2 |
-1.7 |
1.4 |
1.6 |
qpx_c37 |
XP_003496481 |
1.35E-41 |
| Heat shock protein 70 kDa 1 |
-2.7 |
-4.1 |
1.6 |
1.9 |
qpx_c366 |
XP_002788182 |
1.24E-33 |
| Heat shock protein 70 kDa 2 |
-2.2 |
-3.1 |
1.6 |
1.6 |
qpx_c2869 |
EGZ24428 |
4.92E-79 |
| Heat shock protein 70 kDa 3 |
-1.7 |
-1.8 |
1.4 |
1.4 |
qpx_c1020 |
XP_001694468 |
9.67E-58 |
| Heat shock protein 90 kDa |
-0.9 |
-4.0 |
1.5 |
1.6 |
qpx_c16851 |
XP_002291118 |
6.50E-49 |
| Heat shock protein 100 kDa |
0.2 |
-3.8 |
1.7 |
0.1 |
qpx_c3466 |
XP_635137 |
5.11E-27 |
| Heat shock protein 18 kDa |
2.2 |
0.5 |
-5.5 |
-6.0 |
qpx_c56 |
NP_662846 |
1.95E-16 |
| Heat shock protein 16 kDa |
0.3 |
1.8 |
-1.9 |
-2.2 |
qpx_c2700 |
ADR66511 |
4.49E-15 |
| Heat shock protein 15 kDa |
0.4 |
1.5 |
-1.6 |
-1.6 |
qpx_c5637 |
YP_969657 |
1.64E-13 |
|
Proteolysis |
|
|
|
|
|
|
|
| Cysteine peptidase C1-1 |
1.9 |
0.5 |
-1.9 |
-5.3 |
qpx_c534 |
XP_002507788 |
1.07E-56 |
| Cysteine peptidase C1-2 |
0.2 |
1.8 |
-1.6 |
-2.2 |
qpx_c5487 |
XP_002178071 |
6.01E-34 |
| Cysteine peptidase C1-3 |
-2.1 |
-1.3 |
0.4 |
2.0 |
qpx_c4154 |
CAB43538 |
1.44E-09 |
| Cysteine peptidase C1-4 |
-3.9 |
4.6 |
-5.5 |
-2.7 |
qpx_c1221 |
EGD76061 |
1.37E-06 |
| Cysteine peptidase C1-5 |
-2.2 |
-2.3 |
1.5 |
1.6 |
qpx_c8710 |
XP_003212177 |
2.04E-13 |
| Metallopeptidase M12B |
-5.9 |
-5.9 |
1.8 |
2.3 |
qpx_c6353 |
ADW54356 |
3.64E-06 |
| Metallopeptidase M32 |
-1.7 |
-1.4 |
1.6 |
1.1 |
qpx_c5681 |
ZP_09027479 |
5.64E-21 |
| Serine peptidase S8-1 |
0.7 |
2.0 |
-3.9 |
-5.7 |
qpx_c765 |
ABI79453 |
1.82E-34 |
| Serine peptidase S8-2 |
-1.3 |
2.2 |
-2.7 |
-2.5 |
qpx_c1822 |
ABI79453 |
3.26E-34 |
| Serine peptidase S8-3 |
-1.8 |
2.6 |
-3.5 |
-3.8 |
qpx_c2550 |
ABI79453 |
2.46E-53 |
| Serine carboxypeptidase S10-1 |
0.3 |
1.7 |
-2.0 |
-1.7 |
qpx_c2447 |
EGB09909 |
1.21E-47 |
| Serine carboxypeptidase S10-2 |
0.7 |
2.0 |
-2.8 |
-2.7 |
qpx_c8079 |
XP_001747631 |
8.39E-08 |
| Serine carboxypeptidase S28-1 |
0.3 |
1.5 |
-1.4 |
-1.4 |
qpx_c13341 |
CCA21035 |
1.27E-13 |
| Serine carboxypeptidase S28-2 |
-0.2 |
1.8 |
-2.2 |
-2.8 |
qpx_c2535 |
EGD81876 |
6.83E-53 |
|
Oxidative stress |
|
|
|
|
|
|
|
| Catalase |
-1.6 |
-2.1 |
1.2 |
1.9 |
qpx_c2181 |
AEX91749 |
1.50E-33 |
| Cu/Zn superoxide dismutase 1 |
-0.6 |
1.9 |
-1.7 |
-2.0 |
qpx_c1801 |
AAN85727 |
6.97E-28 |
| Cu/Zn superoxide dismutase 2 |
-0.3 |
1.7 |
-1.7 |
-1.8 |
qpx_c3152 |
ADN04915 |
9.10E-40 |
| Mg/Fe superoxide dismutase |
-0.4 |
1.9 |
-2.2 |
-1.9 |
qpx_c6686 |
XP_002958078 |
2.13E-27 |
| Superoxide NADPH oxidase |
-1.8 |
-1.8 |
1.5 |
1.5 |
qpx_c1054 |
EGB04413 |
5.01E-24 |
| Thioredoxin 1 |
-0.4 |
1.9 |
-1.9 |
-2.2 |
qpx_c1718 |
XP_765168 |
4.11E-25 |
| Thioredoxin 2 |
-1.2 |
1.6 |
-1.4 |
-1.3 |
qpx_c2033 |
XP_002402396 |
3.08E-27 |
| Thioredoxin 3 |
-0.2 |
1.9 |
-2.2 |
-2.5 |
qpx_c4189 |
XP_001800478 |
8.60E-19 |
| Thioredoxin reductase 1 |
0.4 |
-1.2 |
-1.2 |
1.5 |
qpx_c1123 |
EEE25525 |
2.45E-38 |
| Thioredoxin reductase 2 |
-1.8 |
-2.0 |
1.5 |
1.4 |
qpx_c2283 |
EGB06390 |
7.90E-46 |
| Thioredoxin reductase 3 |
1.1 |
1.3 |
-1.2 |
-1.6 |
qpx_c3882 |
XP_002181543 |
4.13E-33 |
|
Polysaccharide synthesis and secretion |
|
|
|
|
|
|
|
| Glycosyltransferase |
-0.8 |
-2.4 |
1.4 |
1.4 |
qpx_c2871 |
XP_002296954 |
3.04E-05 |
| Bligosaccharyl transferase |
-1.4 |
-2.2 |
1.4 |
1.5 |
qpx_c5264 |
XP_002185367 |
2.06E-22 |
| Beta-amylase/glucosidase |
-4.2 |
-1.2 |
1.3 |
1.8 |
qpx_c1194 |
ZP_08507128 |
2.84E-13 |
| Alpha-amylase/glucosidase |
-4.9 |
-4.8 |
1.7 |
2.2 |
qpx_c114 |
YP_750476 |
1.26E-32 |
| Sugar transporter 1 |
-1.5 |
-1.4 |
1.3 |
1.5 |
qpx_c6741 |
XP_003452761 |
1.54E-13 |
| Sugar transporter 2 |
-3.4 |
-2.1 |
1.5 |
2.0 |
qpx_c730 |
XP_642887 |
2.37E-12 |
| gdp-mannose-3-epimerase |
-1.5 |
-1.1 |
1.2 |
1.3 |
qpx_c4458 |
XP_002956437 |
8.07E-94 |
| udp-galactose-4-epimerase |
0.1 |
-3.1 |
1.4 |
1.5 |
qpx_c5964 |
ZP_08151628 |
5.96E-34 |
| udp-glucose gdp-mannose dehydrogenase |
-7.9 |
-5.1 |
2.5 |
1.2 |
qpx_c15700 |
ZP_06587676 |
1.90E-28 |
| udp-glucose 6-dehydrogenase |
-2.6 |
-3.7 |
1.7 |
1.9 |
qpx_c7532 |
CBJ28343 |
1.02E-25 |
| Integrin-related protein 1 |
-2.0 |
-1.4 |
1.5 |
1.5 |
qpx_c5688 |
EGB09976 |
3.30E-07 |
| Integrin-related protein 2 |
-2.2 |
-2.2 |
1.6 |
1.5 |
qpx_lrc9075 |
ZP_08823332 |
9.08E-08 |
| Syntaxin | -2.5 | -2.6 | 1.6 | 1.8 | qpx_c324 | EGB05290 | 1.40E-15 |
Mean fold changes are shown (3 biological replicates).