Table 1.
Cell line specific expressed and repressed RTSSs and their association with genomic regions
| Total | Annotated | Proximal | Intragenic | Intergenic | ||
|---|---|---|---|---|---|---|
| K562 |
Expressed |
41 472 |
6 793 |
18 134 |
15 090 |
8 248 |
| Repressed |
122 575 |
3 678 |
17 105 |
64 677 |
40 793 |
|
| GM12878 |
Expressed |
54 475 |
7 151 |
19 998 |
22 949 |
11 528 |
| Repressed |
101 964 |
3 084 |
14 395 |
52 675 |
34 894 |
|
| HeLaS3 |
Expressed |
50 324 |
7 055 |
19 892 |
20 429 |
10 003 |
| Repressed |
107 756 |
3 311 |
14 831 |
55 866 |
37 059 |
|
| HepG2 | Expressed |
52 862 |
7 311 |
21 005 |
22 305 |
9 552 |
| Repressed | 105 793 | 2 973 | 13 623 | 54 193 | 37 977 |