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. 2014 Apr 16;34(16):5454–5467. doi: 10.1523/JNEUROSCI.4350-13.2014

Table 1.

The number of neuron pairs, significant excitatory connections, and the experimentally derived detection probability of excitatory connection pairs pαn in our data counted in three different ways for comparison with intracellular and extracellular recording studies

Datasets Counting method
Song et al. (2005) Present study Fujisawa et al., (2008)
Rat 1
    Novel
        No. neuron pairs 36 276 820*
        No. EE1 connections 5 6 6
        No. EE2 connections 1 1 1
        No. unconnected pairs 30 269 813*
        pαn (connectivity)** 0.10 0.01 0.00
    Sequence
        No. neuron pairs 22 210 528*
        No. EE1 connections 9 12 12
        No. EE2 connections 2 3 3
        No. unconnected pairs 11 195 513*
        pαn (connectivity)** 0.30 0.04 0.02
Rat 2
    Novel
        No. neuron pairs 26 153 780*
        No. EE1 connections 2 2 2
        No. EE2 connections 1 1 1
        No. unconnected pairs 23 150 777*
        pαn(connectivity)** 0.08 0.01 0.00
    Sequence
        No. neuron pairs 5 55 325*
        No. EE1 connections 1 1 1
        No. EE2 connections 0 0 0
        No. unconnected pairs 4 54 324*
        pαn (connectivity)** 0.10 0.01 0.00
Rat 3
    Novel
        No. neuron pairs 77 253 903*
        No. EE1 connections 4 4 4
        No. EE2 connections 0 0 0
        No. unconnected pairs 73 249 899*
        pαn (connectivity)** 0.03 0.01 0.00
    Sequence
        No. neuron pairs 109 496 1431*
        No. EE1 connections 6 10 10
        No. EE2 connections 9 3 3
        No. unconnected pairs 100 483 1418*
        pαn (connectivity)** 0.11 0.02 0.01
Total No. neuron pairs 275 1443 4787*

*Includes inhibitory and unclassified neurons as well as excitatory neurons, whereas all other counts contain excitatory neurons only;

**α = abs, n = 25.

The number of neuron pairs, the number of unidirectional excitatory connections (EE1), the number of reciprocal excitatory connections (EE2), and the number of unconnected neuron pairs (NO), as well as the connection probability (detection probability of excitatory connections, pα25, Eq. 1) for the 25 h recordings are reported in three different ways in order to compare them to intracellular recording studies (Song et al., 2005) and to extracellular recordings (Fujisawa et al., 2008 and the counting method in this paper, in which we only consider excitatory neurons across all tetrodes). Therefore, all three columns contain our data, simply reported according to three different counting methods, which are detailed below.

Formula for calculating the number of neuron pairs for Song et al. (2005) criteria:
graphic file with name zns01614-5490-m10.jpg
where nEE,i is the total number of excitatory neurons within tetrode i and NTT is the total number of tetrodes.
Formula for calculating the number of neuron pairs for our criteria:
graphic file with name zns01614-5490-m11.jpg
where nEE is the total number of excitatory neurons.
Formula for calculating the number of neuron pairs for Fujisawa et al. (2008) criteria:
graphic file with name zns01614-5490-m12.jpg
where nall is the total number of all recorded neurons, including inhibitory and unclassified neurons.

The formula for calculating the connection probability of excitatory neuron pairs pαn was provided by Equation 1.