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. 2014 May;101(100):5–15. doi: 10.1016/j.phytochem.2014.02.010

Table 1.

List of peptides found by nanoUHPLC–ESI-MS/MS protein identification experiments of jrPPO1(Asp101 → Pro444). Sequence coverage: 96%.

Start–End Sequence Modifications XCorr Delta Mass [ppm] Enzyme for digestion Peptide mass
101–108 DPVSAPEL 1.5 −0.93 Chymotrypsin 826.406
101–110 DPVSAPELTL 1.97 0.46 Chymotrypsin 1040.539
101–131 DPVSAPELTLcSEADLPAGALPVNccPPTSK C11(Carbamidomethyl); C25(Carbamidomethyl); C26(Carbamidomethyl) 6.51 −1.72 Trypsin 3265.524
111–136 cSEADLPAGALPVNccPPTSKKIKDF C1(Carbamidomethyl); C15(Carbamidomethyl); C16(Carbamidomethyl) 5.5 −1.18 Chymotrypsin 2874.368
122–136 PVNccPPTSKKIKDF C4(Carbamidomethyl); C5(Carbamidomethyl) 3.4 0.91 Chymotrypsin 1789.887
132–146 KIKDFVLPSQNTPLR 4.86 −2 Trypsin 1755.000
133–146 IKDFVLPSQNTPLR 5.05 −2.46 Trypsin 1626.905
135–146 DFVLPSQNTPLR 3.06 −118 Trypsin 1385728
139–153 PSQNTPLRVRPAAHL 1.62 2.05 Chymotrypsin 1655.925
146–153 RVRPAAHL 2.03 −1.21 Chymotrypsin 918.550
146–158 RVRPAAHLVDNDY 3 1.99 Chymotrypsin 1524.782
146–162 RVRPAAHLVDNDYIAKY 4.22 0 Chymotrypsin 2000.059
147–161 VRPAAHLVDNDYIAK 5.17 −1.54 Trypsin 1680.892
154–162 VDNDYIAKY 2.51 0.48 Chymotrypsin 1099.519
162–170 YNKGIELmK M8(Oxidation) 2.17 −1.16 Trypsin 1110.573
163–168 NKGIEL 1.85 −0.4 Chymotrypsin 672.380
163–180 NKGIELmKSLPADDPRSF M7(Oxidation) 5.07 −1.8 Chymotrypsin 2033.021
163–180 NKGIELMKSLPADDPRSF 4.73 −0.13 Chymotrypsin 2017.030
169–180 mKSLPADDPRSF M1(Oxidation) 3.53 −0.13 Chymotrypsin 1378.654
169–180 MKSLPADDPRSF 2.91 −1.08 Chymotrypsin 1362.658
171–178 SLPADDPR 1.7 −1.54 Trypsin 869.422
173–180 PADDPRSF 1.65 −0.44 Chymotrypsin 903.408
181–190 TQQANVHcAY C8(Carbamidomethyl) 2.21 −1.43 Chymotrypsin 1190.512
181–195 TQQANVHcAYcDGAY C8(Carbamidomethyl); C11(Carbamidomethyl) 2.5 −1.49 Chymotrypsin 1756.690
196–203 TQVGFPDL 2.03 0.15 Chymotrypsin 875.439
196–205 TQVGFPDLSL 2.18 0.34 Chymotrypsin 1075.555
219–226 YYVYFFEK 2.61 −2.57 Trypsin 1157.540
219–230 YYVYFFEKILGK 2.12 −1.23 Trypsin 1568.825
224–231 FEKILGKL 2.68 0.42 Chymotrypsin 946.585
225–237 EKILGKLIGDPTF 3.38 −0.64 Chymotrypsin 1429.817
229–237 GKLIGDPTF 2.45 −0.14 Chymotrypsin 946.512
231–268 LIGDPTFALPFWNWDSPPGmQLPSLYAVSNSAIYDPLR M20(Oxidation) 6.57 0.27 Trypsin 4264.099
231–268 LIGDPTFALPFWNWDSPPGMQLPSLYAVSNSAIYDPLR 4.55 −1.96 Trypsin 4248.094
245–256 DSPPGmQLPSLY M6(Oxidation) 2.26 1.09 Chymotrypsin 1319.608
245–256 DSPPGMQLPSLY 2.72 0.57 Chymotrypsin 1303.612
257–267 AVSNSAIYDPL 1.69 −0.12 Chymotrypsin 1148.571
257–280 AVSNSAIYDPLRNANHQPPTIIDL 2.94 1.12 Chymotrypsin 2618.348
265–280 DPLRNANHQPPTIIDL 3.09 −1.55 Chymotrypsin 1812.945
268–280 RNANHQPPTIIDL 2.32 0.19 Chymotrypsin 1487.784
268–299 RNANHQPPTIIDLDYGETSESTTTTDQVPSNL 7.47 −3.7 Chymotrypsin 3513.636
269–300 NANHQPPTIIDLDYGETSESTTTTDQVPSNLK 7.62 −0.96 Trypsin 3485.640
281–299 DYGETSESTTTTDQVPSNL 2.95 2.68 Chymotrypsin 2043.881
300–316 KImYRQmVSGAKNPTLF M3(Oxidation); M7(Oxidation) 1.47 0.1 Chymotrypsin 2015.033
301–311 ImYRQmVSGAK M2(Oxidation); M6(Oxidation) 2.21 −0.22 Trypsin 1314.642
304–316 RQmVSGAKNPTLF M3(Oxidation) 4.59 1.53 Chymotrypsin 1463.757
304–316 RQMVSGAKNPTLF 4.15 −0.15 Chymotrypsin 1447.760
304–317 RQmVSGAKNPTLFF M3(Oxidation) 3.57 0.8 Chymotrypsin 1610.825
304–317 RQMVSGAKNPTLFF 3.47 0.88 Chymotrypsin 1594.830
312–322 NPTLFFGSPYR 3.89 −2.13 Trypsin 1297.642
322–344 RAGDEPDPGAGTIESTPHNNIHL 6.32 −0.98 Chymotrypsin 2397.128
322–345 RAGDEPDPGAGTIESTPHNNIHLW 8.24 −0.92 Chymotrypsin 2583.207
345–361 WTGDDTQPNIENmGNFY M13(Oxidation) 1.9 2.95 Chymotrypsin 2016.821
346–360 TGDDTQPNIENmGNF M12(Oxidation) 3.18 0.09 Chymotrypsin 1667.673
346–360 TGDDTQPNIENMGNF 2.79 0.34 Chymotrypsin 1651.679
346–361 TGDDTQPNIENmGNFY M12(Oxidation) 3.34 −0.1 Chymotrypsin 1830.736
346–361 TGDDTQPNIENMGNFY 3.3 2.27 Chymotrypsin 1814.745
361–370 YSAGRDPIFF 2.84 1.15 Chymotrypsin 1171.567
362–370 SAGRDPIFF 2.25 0.63 Chymotrypsin 1008.503
362–380 SAGRDPIFFAHHSNVDRmW M18(Oxidation) 4.74 0.12 Chymotrypsin 2258.044
366–378 DPIFFAHHSNVDR 4.07 −2.16 Trypsin 1553.734
366–389 DPIFFAHHSNVDRmWTIWKTLGGK M14(Oxidation) 3.01 −1.14 Trypsin 2871.424
371–380 AHHSNVDRmW M9(Oxidation) 2.93 −1.01 Chymotrypsin 1267.550
371–380 AHHSNVDRMW 3.42 −0.36 Chymotrypsin 1251.556
371–383 AHHSNVDRmWTIW M9(Oxidation) 4 −1.68 Chymotrypsin 1667.759
371–383 AHHSNVDRMWTIW 2.33 0.11 Chymotrypsin 1651.767
371–386 AHHSNVDRmWTIWKTL M9(Oxidation) 2.48 −1.23 Chymotrypsin 2009.986
379–384 mWTIWK M1(Oxidation) 1.88 −2.53 Trypsin 879.429
379–384 MWTIWK 1.88 −2.18 Trypsin 863.434
379–389 mWTIWKTLGGK M1(Oxidation) 2.36 −1.39 Trypsin 1335.699
384–399 KTLGGKRKDITDPDWL 3.77 −1.36 Chymotrypsin 1841.997
387–399 GGKRKDITDPDWL 3.74 −0.94 Chymotrypsin 1499.771
387–403 GGKRKDITDPDWLNSSF 3.6 −0.87 Chymotrypsin 1934.946
390–414 RKDITDPDWLNSSFFFYDENADPVR 4.9 −0.72 Trypsin 3046.407
391–414 KDITDPDWLNSSFFFYDENADPVR 7.02 −1.3 Trypsin 2890.304
392–414 DITDPDWLNSSFFFYDENADPVR 6.48 −1.21 Trypsin 2762.210
392–416 DITDPDWLNSSFFFYDENADPVRVK 2.67 −0.2 Trypsin 2989.376
405–426 FYDENADPVRVKVKDcVDNTKL C16(Carbamidomethyl) 6.06 2.94 Chymotrypsin 2624.298
406–426 YDENADPVRVKVKDcVDNTKL C15(Carbamidomethyl) 7.26 −2.45 Chymotrypsin 2477.216
406–428 YDENADPVRVKVKDcVDNTKLRY C15(Carbamidomethyl) 7.6 −1.21 Chymotrypsin 2796.383
407–426 DENADPVRVKVKDcVDNTKL C14(Carbamidomethyl) 6.25 −1.18 Chymotrypsin 2314.156
407–428 DENADPVRVKVKDcVDNTKLRY C14(Carbamidomethyl) 6.73 −0.72 Chymotrypsin 2633.321
415–425 VKVKDcVDNTK C6(Carbamidomethyl) 1.48 −0.38 Trypsin 1304.675
417–427 VKDcVDNTKLR C4(Carbamidomethyl) 3.09 0.1 Trypsin 1346.697
427–437 RYVYQDVEIPW 2.86 −0.83 Chymotrypsin 1466.718
428–439 YVYQDVEIPWLK 4.01 −0.47 Trypsin 1551.796
428–444 YVYQDVEIPWLKTKPTP 3.39 −0.83 Trypsin 2076.091
429–437 VYQDVEIPW 1.91 0.01 Chymotrypsin 1147.554
429–438 VYQDVEIPWL 1.72 −0.64 Chymotrypsin 1260.638
431–437 QDVEIPW 1.95 −0.85 Chymotrypsin 885.422
431–444 QDVEIPWLKTKPTP 3.47 −0.39 Chymotrypsin 1650.897
438–444 LKTKPTP 1.84 −0.35 Chymotrypsin 783.485