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. 2014 Apr 16;9(4):e95199. doi: 10.1371/journal.pone.0095199

Table 2. Primers used in molecular cloning of Bactrocera dorsalis' ryanodine receptor cDNA and diagnostic PCR.

Primer name Primer sequence (5'-3') Description (cDNA position)
P1-F GCAAGAACATAGCCAAGGTGAG RT-PCR product P1 (600–2181)
P1-R TCCATCTACTTGACCAACAAAAATA
P2-F GGGGAGGAAACGGTGTAGGTGAT RT-PCR product P2 (2318–2810)
P2-R GAAGAAGGAAGTGCGACACCAGAAG
P3-F TACGACATACAACTGCGGCATAGGG RT-PCR product P3 (6238–7559)
P3-R GGACGGCGGATAAGAAGACGAATGA
P4-F GAAAGTGGATGGTCCTATGGCGAGA RT-PCR product P4 (8815–10 076)
P4-R TGTGTGAGCGTTCCATCAGTTCCTA
P5-F TTGTTCGGGACATTTATTCG RT-PCR product P5 (10 739–11 365)
P5-R CTTGCGTCTTGTCCTTGCCTTTATC
P6-F TGGGAATAGCAATACTCCGTGGTGG RT-PCR product P6 (12 011–12 594)
P6-R GAAACCCCCAACAGCGTCCCATAAA
P7-F GTTTAGCCCGATTTTTAGAGACAGC RT-PCR product P7 (13 094–14 169)
P7-R GAGGAAACTAACGGCACGAT
RyR-5'-R1 TTTCTCGCCTTCAGACCTTTGTTTACT 5'RACE product 5'-End (1–675)
RyR-5'-R2 ATAAAGCAATGTCCTGTGACCAGAACC
RyR-3'-F1 TAAAGGAGTGCGGGCAGGAGGAGGAA 3'RACE product 3'-End (15 159–15 753)
RyR-3'-F2 CCCGACGGAGATGACTACGAAGTTTAT
PCRI-F TGAATAGCAATTTTGACCGAGCACC overlapping cDNA fragment PCRI (177–5458)
PCRI-R TGCAGCGATCTTCTTCGGGTATGTG
PCRII-F CTCTTTCTGCTGCTGTTCTCCCTAC overlapping cDNA fragment PCRII (5237–10 073)
PCRII-R GTGAGCGTTCCATCAGTTCCTA
PCRIII-F TTCGTAATCGTCTTAGTGCCTTTG overlapping cDNA fragment PCRIII (9677–15 626)
PCRIII-R TAACTACCTCCACCACCTCCTGATA
ASIa-F CAGGTGAAGGCAATGAGGGA diagnostic PCR for exon a
ASIa-R ATCTAAGAACACGCCGACAAT
ASIb-F CAGGTGAAGGCAATGAGG diagnostic PCR for exon b
ASIb-R ACCTTCCTCATACCGAACACC
ASII-F1 CATCTAGTTTACCAAGTGTTTCC diagnostic PCR for the presence of exon c
ASII-R1 ACATCCGTAAGAACGCCAAC
ASII-F2 TACGCAATAAGGTCCGAATA diagnostic PCR for the absence of exon c
ASII-R2 GTTGGGTATTGGTTCTGTAA
ASIII-F1 GCCAATCCAAACCACAAATCAACGA diagnostic PCR for the presence of exon d
ASIII-R1 ACTCCTCCTTTAGATGGCTTGTGTA
ASIII-F2 TCCAAACCACAAATCAGTGAAAGCA diagnostic PCR for the absence of exon d
ASIII-R2 AGTCATAAGGAACAAGTTGAGGAT
ASIV-F1 TACATTCCAAGTGCGGGTGC diagnostic PCR for the presence of exon e
ASIV-R1 AGCGTCCCATAAACGAGAAT
ASIV-F2 TAGCAATACTCCGTGGTGGT diagnostic PCR for the absence of exon e
ASIV-R2 GAACCTACACCAAGACCTTCTGCCT