Table 1. Primers used for PCR amplification of resistance genes.
Gene | Primer | Sequence(5′→3′) | Annealing Temp(°C) | Fragment(bp) | Reference |
bla TEM | TEM-F | TCAACATTTCCGTGTCG | 56 | 860 | [27] |
TEM-R | CTGACAGTTACCAATGCTTA | ||||
bla SHV | SHV-F | ATGCGTTATATTCGCCTGTG | 56 | 896 | [27] |
SHV-R | AGATAAATCACCACAATGCGC | ||||
bla CTX-M-1 | M-1F | CCGTTTCCGCTATTACAAACCGTTG | 56 | 944 | [37] |
M-1R | GGCCCATGGTTAAAAAATCACTGC | ||||
bla CTX-M-2 | M-2F | ATGATGACTCACAGCATTCG | 56 | 833 | [38] |
M-2R | TCCCGACGGCTTTCCGCGTT | ||||
bla CTX-M-8 | M-8F | TTTGCCCGTGCGATTGG | 50 | 368 | [28] |
M-8R | CGACTTTCTGCCTTCTGCTCT | ||||
bla CTX-M-9 | M-9F | ATGGTGACAAAGAGAGTGCA | 50 | 870 | [39] |
M-9R | CCCTTCGGCGATGATTCTC | ||||
bla CTX-M-10 | M-10F | GCAGCACCAGTA AAGTGATGG | 56 | 524 | [36] |
M-10R | GCGATATCGTTGGTGGTACC | ||||
bla CTX-M-14 | M-14F | GAGAGTGCAACGGATGATG | 56 | 941 | [29] |
M-14R | TGCGGCTGGGTAAAATAG | ||||
bla CMY-G1 | G1-F | GCTGACAGCCTCTTTCTCCAC | 56 | 1082 | [40] |
G1-R | CCTCGACACGGRCAGGGTTA | ||||
bla CMY-G2 | G2-F | GGTCTGGCCCATGCAGGTGA | 56 | 963 | [40] |
G2-R | GGTCGAGCCGGTCTTGTTGA | ||||
bla DHA | DHA-F | AACTTTCACAGGTGTGCTGGGT | 60 | 405 | [30] |
DHA-R | CCGTACGCATACTGGCTTTGC | ||||
bla ACT | ACT-F | ATTCGTATGCTGGATCTCGCCACC | 50 | 396 | [31] |
ACT-R | CATGACCCAGTTCGCCATATCCTG | ||||
bla FOX | FOX-F | CACCACGAGAATAACC | 50 | 1184 | [31] |
FOX-R | GCCTTGAACTCGACCG | ||||
bla KPC | KPC-F | TGTCACTGTATCGCCGTCTAG | 50 | 880 | [26] |
KPC-R | TTACTGCCCGTTGACGCCCAATCC | ||||
bla GES | GES-F | ATGCGCTTCATTCACGCAC | 56 | 591 | [41] |
GES-R | CTATTTGTCCGTGCTCAGG | ||||
bla IMI | IMI-F | ATGTCATTAGGTGATATGGC | 50 | 879 | [32] |
IMI-R | GCATAATCATTTGCCGTACC | ||||
bla IMP | IMP-F | GGAATAGAGTGGCTTAATTCTC | 50 | 624 | [32] |
IMP-R | CCAAACCACTACGTTATC | ||||
bla VIM | VIM-F | GATGGTGTTTGGTCGCATA | 50 | 390 | [33] |
VIM-R | CGAATGCGCAGCACCAG | ||||
bla GIM | GIM-F | TCGACACACCTTGGTCTGAA | 56 | 477 | [42] |
GIM-R | AACTTCCAACTTTGCCATGC | ||||
bla SPM | SPM-F | AAATCTGGGTACGCAAACG | 56 | 270 | [22] |
SPM-R | AGATTATCGGCTGGAACAGG | ||||
bla SIM | SIM-F | TACAAGGGATTCGGCATCG | 56 | 570 | [42] |
SIM-R | TAATGGCCTGTTCCCATGTG | ||||
bla NDM-1 | NDM-F | TGCCCAATATTATGCACCCGG | 60 | 621 | [25] |
NDM-R | CGAAACCCGGCATGTCGAGA | ||||
bla OXA-48 | 48-F | TTGGTGGCATCGATTATCGG | 56 | 743 | [34] |
48-R | GAGCACTTCTTTTGTGATGGC |