Table 2.
Genetic Association of CASQ2 SNPs with SCA and with CHF status
rsID | MAF | Allele* | Call Rate | SCA | CHF | ||
---|---|---|---|---|---|---|---|
ORadj (95% CI)S | P | ORadj (95% CI)C | P | ||||
rs7521023 | 0.363 | A>G | 98.6 | 2.7 (1.44–5.13)D | 0.002 | 0.4 (0.25–0.76)D | 0.003 |
rs17034260 | 0.382 | C>T | 99.8 | 0.5 (0.29–0.94)D | 0.030 | 1.3 (0.85–1.86)A | 0.245 |
rs3811003 | 0.311 | G>A | 99.8 | 0.8 (0.52–1.27)A | 0.360 | 2.7 (1.16–6.34)R | 0.022 |
rs66842091 | 0.181 | C>T | 100.0 | 0.8 (0.44–1.28)A | 0.299 | 19.8 (3.63–108.2)R,C | <0.001 |
rs109232391 | 0.215 | A>T | 99.5 | 0.8 (0.49–1.37)A | 0.458 | 11.1 (2.39–50.9)R | 0.002 |
rs66659701 | 0.419 | G>A | 98.8 | 1.4 (0.92–2.13)A | 0.112 | 0.53 (0.30–0.95)D | 0.031 |
rs356729291 | 0.232 | T>G | 99.3 | 0.7 (0.41–1.15)A | 0.155 | 1.13 (0.73–4.41)A | 0.577 |
rs66770741 | 0.465 | C>A | 100.0 | 0.5 (0.23–0.98)R | 0.045 | 1.90 (1.01–4.47)R | 0.045 |
rs9428211 | 0.460 | C>T | 97.7 | 0.5 (0.23–1.01)R | 0.052 | 1.23 (0.84–1.85)A | 0.288 |
rs10754356 | 0.313 | A>G | 99.1 | 0.7 (0.47–1.14)A | 0.163 | 1.23 (0.82–1.86)A | 0.315 |
rs109234182 | 0.428 | G>A | 100.0 | 0.5 (0.22–1.06)R | 0.071 | 1.08 (0.74–1.59)A | 0.684 |
rs94280902 | 0.459 | G>A | 99.5 | 2.3 (1.15–4.40)D | 0.018 | 0.88 (0.60–1.30)A | 0.515 |
rs4074536 | 0.317 | T>C | 99.5 | 0.9 (0.59–1.35)A | 0.587 | 1.10 (0.74–1.62)A | 0.642 |
Abbreviations: 95% CI = 95% confidence interval; MAF = minor allele frequency; ORadj = covariate-adjusted odds ratio; P = p-value; rsID = reference sequence IDentifier.
The alleles for each SNP are listed as follows: common > rare.
SNPs in haploblock 1
SNPs in haploblock 2
An additive genetic model fit the data best.
A dominant genetic model fit the data best.
A recessive genetic model fit the data best.
SNP is associated with SCA after adjustment for age, CHF status.
SNP is associated with CHF status after adjustment for age, gender, hypertension SCA.