Table 3.
Assembly statistics for the genomes sequenced in this study.
| C191 | C3 | C49 | Cb34 | E3 | E8 | Ea1 | Ea8 | Eb13 | Ec15 | Fb21 | G37 | Ga2p | Ga36 | Hd13 | Ib24 | LD3 | LG1 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N75 (kb) | 18.9 | 2.3 | 23.2 | 24.7 | 1.1 | 1.3 | 30.0 | 25.1 | 25.4 | 42.7 | 25.3 | 27.2 | 41.1 | 23.8 | 32.1 | 23.2 | 21.4 | 8.4 |
| N50 (kb) | 54.9 | 4.4 | 56.3 | 42.9 | 1.9 | 2.3 | 43.8 | 51.6 | 51.6 | 80.3 | 42.7 | 68.1 | 74.9 | 51.2 | 64.4 | 43.4 | 39.6 | 32.1 |
| N25 (kb) | 97.3 | 7.8 | 99.8 | 73.4 | 3.5 | 4.0 | 77.5 | 95.4 | 95.7 | 131.8 | 90.3 | 118.4 | 118.9 | 91.9 | 83.0 | 68.2 | 76.0 | 67.9 |
| Minimum (kb) | 0.5 | 0.4 | 0.5 | 0.5 | 0.4 | 0.4 | 0.5 | 0.5 | 0.5 | 0.6 | 0.5 | 0.5 | 0.3 | 0.5 | 0.5 | 0.5 | 0.5 | 0.4 |
| Maximum (kb) | 180.2 | 40.5 | 183.6 | 123.4 | 26.7 | 25.0 | 203.3 | 169.6 | 268.1 | 412.4 | 174.7 | 230.0 | 246.3 | 145.6 | 122.0 | 190.3 | 145.8 | 153.4 |
| Average (kb) | 16.6 | 2.9 | 22.5 | 23.1 | 1.5 | 1.8 | 24.7 | 22.6 | 23.3 | 44.3 | 20.6 | 25.7 | 40.3 | 21.0 | 27.9 | 19.6 | 17.5 | 4.4 |
| Contig count | 233 | 1165 | 159 | 145 | 2764 | 1278 | 159 | 166 | 156 | 74 | 176 | 138 | 83 | 160 | 137 | 189 | 213 | 1090 |
| Length (Mb) | 3.87 | 3.33 | 3.58 | 3.35 | 4.21 | 2.26 | 3.93 | 3.75 | 3.63 | 3.28 | 3.63 | 3.55 | 3.35 | 3.36 | 3.82 | 3.70 | 3.73 | 4.79 |
| Base composition (GC%) | 66.0 | 65.8 | 65.8 | 67.6 | 65.5 | 66.3 | 67.0 | 67.6 | 67.5 | 67.6 | 66.6 | 67.1 | 67.8 | 67.7 | 67.6 | 67.6 | 66.2 | 66.0 |
| Number of coding sequences | 3908 | 3379 | 3529 | 3323 | 4147 | 2187 | 3977 | 3672 | 3544 | 3245 | 3600 | 3617 | 3400 | 3382 | 3718 | 3612 | 3724 | 4615 |
| Number of RNAs | 57 | 37 | 49 | 54 | 51 | 31 | 50 | 49 | 48 | 47 | 65 | 48 | 49 | 47 | 51 | 48 | 56 | 69 |