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. 2014 Apr 17;10(4):e1004261. doi: 10.1371/journal.pgen.1004261

Table 1. Functional enrichment of PFAM and TIFRfam domains in differentially expressed gene clusters.

Cluster 6; 699 transcripts
Pfam or TIGRfam domain Cluster 6 Other genes p-value Corr p-value Relative proportion Role
PF07690.11 Major Facilitator Superfamily 69 107 0 0 5,39 Transport
TIGR00879 MFS transporter, sugar porter (SP) family 24 24 8,19E-12 5,40E-09 8,37 Transport
PF00083.19 Sugar (and other) transporter 33 58 5,89E-11 2,59E-08 4,76 Transport
PF04082.13 Fungal specific transcription factor domain 26 47 1,05E-08 3,47E-06 4,63 Transcription
PF01408.17 Oxidoreductase family, NAD-binding Rossmann fold 12 6 1,99E-08 5,25E-06 16,73 Redox reactions
PF00172.13 Fungal Zn(2)-Cys(6) binuclear cluster domain 28 62 8,37E-08 1,84E-05 3,78 Transcription
PF13561.1 Enoyl-(Acyl carrier protein) reductase 14 18 1,62E-06 3,05E-04 6,51 Lipid metabolism
PF00106.20 short chain dehydrogenase 16 28 5,51E-06 9,09E-04 4,78 Lipid metabolism
PF00441.19 Acyl-CoA dehydrogenase, C-terminal domain 6 1 9,20E-06 1,21E-03 50,2 Lipid metabolism
PF02770.14 Acyl-CoA dehydrogenase, middle domain 6 1 9,20E-06 1,21E-03 50,2 Lipid metabolism
PF08028.6 Acyl-CoA dehydrogenase, C-terminal domain 5 0 1,36E-05 1,64E-03 4183060,11 Lipid metabolism
PF00501.23 AMP-binding enzyme 6 3 9,14E-05 7,54E-03 16,73
PF01266.19 FAD dependent oxidoreductase 10 14 8,67E-05 7,54E-03 5,98 Redox reactions
PF02771.11 Acyl-CoA dehydrogenase, N-terminal domain 5 1 7,47E-05 7,54E-03 41,83 Lipid metabolism
PF02894.12 Oxidoreductase family, C-terminal alpha/beta domain 6 3 9,14E-05 7,54E-03 16,73 Redox reactions
PF08659.5 KR domain 12 21 8,37E-05 7,54E-03 4,78
PF00701.17 Dihydrodipicolinate synthetase family 4 0 1,29E-04 9,44E-03 3346448,09
PF07350.7 Protein of unknown function (DUF1479) 4 0 1,29E-04 9,44E-03 3346448,09 Unknown