Table 1. Summary population genetic data for Plasmodium vivax antigens.
Country of Origin | n 1 | S 2 | K 3 | π 4 | H 5 | Hd 6 | Tajima's D |
pvmsp-1 : 42 kDa region | |||||||
Cambodia | 44 | 62 | 24.8 | 0.020 | 26 | 0.950 | 2.08* |
India | 28 | 64 | 24.9 | 0.021 | 27 | 0.997 | 1.32* |
NW Thailand | 65 | 62 | 24.9 | 0.020 | 34 | 0.968 | 2.42* |
S Thailand | 67 | 42 | 6.46 | 0.005 | 5 | 0.336 | −0.986 |
Turkey | 30 | 33 | 8.33 | 0.007 | 3 | 0.536 | −0.001 |
pvcsp : N- and C-terminal non-repeat regions | |||||||
Cambodia | 47 | - | - | - | 24 | - | - |
N-terminal non-repeat | 3 | 0.971 | 0.003 | 3 | 0.500 | 0.901 | |
C-terminal non-repeat | 2 | 0.318 | 0.001 | 2 | 0.159 | −0.538 | |
Columbia | 27 | - | - | - | 27 | - | - |
N-terminal non-repeat | 2 | 0.285 | 0.001 | 2 | 0.143 | −0.954 | |
C-terminal non-repeat | 0 | - | - | 1 | 0.000 | - |
This table includes all population sequence sets which contained sufficient numbers to perform allele-based tests of neutrality. Population sets which included sequence data only for pvcsp repeat regions alone are not summarized here.
*p<0.05;
number of haplotypes;
within-population variant sites;
average number of nucleotide differences;
nucleotide diversity;
number of haplotypes;
haplotype diversity.