Table 1. Absolute and normalized frequency of total and salt-bridge forming acidic and basic residues as obtained from 20 halophilic proteins (see Materials and Methods).
Residues/class | |||||
Arg | 279 | 5.61 | 127 | 2.55 | 45.45 |
Lys | 144 | 2.89 | 57 | 1.14 | 39.44 |
His | 129 | 2.59 | 39 | 0.78 | 30.11 |
Basic | 552 | 11.09 | 223 | 4.47 | 40.30 |
Asp | 501 | 10.07 | 126 | 2.53 | 25.12 |
Glu | 482 | 9.69 | 145 | 2.92 | 30.13 |
Acidic | 983 | 19.76 | 271 | 5.45 | 27.58 |
Total | 1535 | 30.85 | 494 | 9.92 | 32.16 |
: Residues absolute frequency in 20 protein chains in the database. : Percent frequency w.r.t. total residues (4975). : Residues salt-bridge absolute frequency. : Percent salt-bridge frequency w.r.t total residues. : Percent salt-bridge frequency w.r.t. corresponding salt-bridge forming residues. Total residues in 20 unique chains 4975.