Table 1.
Summary of mutations, detection methods and cohorts compositions for the reported patients. All genomic coordinates relate to genome build GRCh37. WES: Whole Exome Sequencing, HRM: High Resolution Melting, MIPs: Molecular Inversion Probes
Patient | Patient ID | Origin | Screening method | Cohort composition | Cohort size | mutation in genomic DNA (chr20) | mutation in cDNA (NM_015339.2) | Protein | Mutation Type | Inheritance |
---|---|---|---|---|---|---|---|---|---|---|
1 | 111294 | Antwerp | WES | Moderate to severe intellectual disability and/or autism + dysmorphic features | 10 | g.49508752_49508755delTTTA | c.2496_2499delTAAA | p.Asp832Lysfs*80 | Frameshift | de novo |
2 | 11-08612 | Nijmegen | WES | Non-syndromic severe intellectual disability | 100 | g.49510040G>T | c.1211C>A | p.Ser404* | Nonsense | de novo |
3 | 12130.p1 | Seattle | WES2,16 | ASD from the Simon Simplex Collection | 189 | g.49510028_49510029delTT | c.1222_1223delAA | p.Lys408Valfs*31 | Frameshift | de novo |
4 | 1050237 | Westmead | WES | Non-syndromic severe intellectual disability | 95 | g.49509086_49509098delATTTGCTCGTAAG | c.2153_2165delCTTACGAGCAAAT | p.Thr718Glyfs*12 | Frameshift | de novo |
5 | 3061-08D | Stockholm | WES | Moderate to severe intellectual disability and/or autism + dysmorphic features | 45 | g.49509094G>C | c.2157C>G | p.Tyr719* | Nonsense | de novo |
6 | 122793 | Antwerp | HRM | Autism | 148 | g.49508757_49508760delTTAA | c.2491_2494delTTAA | p.Lys831Ilefs*81 | Frameshift | de novo |
7 | 07-06960 | Nijmegen | MIPs | Intellectual disability and/or autism | 2743* | g.49508443delG | c.2808delC | P.Tyr936* | Frameshift | de novo |
8 | 2376 | Troina | MIPs | Intellectual disability and/or autism | 2743* | g.49508757_49508760delTTAA | c.2491_2494delTTAA | p.Lys831Ilefs*81 | Frameshift | de novo |
9 | 2533 | Troina | MIPs | Intellectual disability and/or autism | 2743* | g.49509321G>A | c.1930C>T | p.644Arg* | Nonsense | parents not available |
10 | 13545.p1 | Seattle | MIPs16 | ASD from the Simon Simplex Collection | 2446 | g.49509094_49509095insT | c.2156_2157insA | p.Tyr719* | Frameshift | de novo |
patients 7, 8 and 9 from the same cohort