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. 2014 Apr 18;9(4):e95118. doi: 10.1371/journal.pone.0095118

Table 1. Locations of predicted Kinase-NL genes in the P. patens genome.

Gene ID
Scaffold Location Kinase NBS LRR
PpKNL1 4 1738811 - 1743286 Pp1s4_271V6.1 2) Pp1s4_269V6.1
PpKNL2 107 727824 - 731384 Pp1s107_101V6.1 Pp1s107_101V6.2 Pp1s107_101V6.3
PpKNL3 113 993176 - 997774 Pp1s113_185V6.1 1)
PpKNL4 158 673509 - 677386 Pp1s158_132V6.1 2) Pp1s158_133V6.1
PpKNL5 158 699611 - 703907 Pp1s158_140V6.1 2) Pp1s158_139V6.1
PpKNL6 17 1526214 - 1532049 Pp1s17_234V6.1 1)
PpKNL7 17 1840397 - 1844127 Pp1s17_276V6.1 Pp1s17_276V6.2 Pp1s17_277V6.1
PpKNL8 180 434595 - 437932 Pp1s180_59V6.1 2) Pp1s180_60V6
PpKNL9 180 685108 - 691200 Pp1s180_101V6.1 1)
PpKNL10 2 1242958 - 1246400 Pp1s2_244V6.1 Pp1s2_245V6.1 Pp1s2_246V6.1
PpKNL11 223 477323 - 482156 Pp1s223_84V6.1 Pp1s223_83V6.1 Pp1s223_81V6.1
PpKNL12 37 146900 - 150243 Pp1s37_18V6.1 2) Pp1s37_19V6.1
PpKNL13 37 325178 - 328605 Pp1s37_60V6.1 2) Pp1s37_59V6.2
PpKNL15 396 165625 - 170945 Pp1s396_25V6.1 2) Pp1s396_28V6.1
PpKNL16 40 1047192 - 1051275 Pp1s40_165V6.1 2) Pp1s40_166V6.1
PpKNL17 508 639 - 6531 Pp1s508_5V6.1 2) Pp1s508_2V6.1
PpKNL18 68 286024 - 289607 Pp1s68_70V6.1 2) Pp1s68_69V6.1

The numbers indicate the start of putative kinase domain regions and the end of LRR regions in the P. patens genome. Scaffold numbers and locations were obtained from the Phytozome database (Ver 9.1). PpKNL1 includes the PpC24 sequence (AB078154, [22]).

1)

Annotated as a single sequence (kinase-NBS-LRR).

2)

Annotated as a kinase-NBS sequence.