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. 2014 Apr 3;15:41. doi: 10.1186/1471-2350-15-41

Table 2.

Indeterminate sequence changes of PKD genes identified by HRM and direct sequencing in a set of patients from the Czech population

Family Gene/exon/intron Nucleotide change Amino acid change/predicted effect Predicted location within PKD domains Reference
308 INDET.
PKD1/15
c.3602C > T
p.Ala1201Val
PKD repeats
Novel
412 INDET.
PKD1/29
c.9718G > A
p.Ala3240Thr
Not defined
Novel
409 INDET.
PKD1/IVS42
c.11712 + 8C > A
Probable splice defect
N/A
Novel
466 INDET. PKD2/IVS 9 c.2019 + 9A > C Probable splice defect N/A Novel

cDNA numbering is based on the reference database: Autosomal Dominant Polycystic Kidney Disease Mutation Database (PKDB) (http://pkdb.mayo.edu). INDET. indeterminate patients (the linkage of ADPKD to PKD1 gene has not been proved); IVS the intronic sequence; Current paper mutation was not described in the Autosomal Dominant Polycystic Kidney Disease Mutation Database (PKDB) (http://pkdb.mayo.edu) and/or in the Human Gene Mutation Database (HGMD) (http://www.hgmd.cf.ac.uk). The potential location of mutations has been established on the basis of theoretical models of polycystins by UniProtKB/Swiss-Prot database (PKD1: P98161, PKD2:Q13563). As not defined are called sequences within PKD proteins with unknown domain structure.