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. 2014 Mar 31;111(15):E1548–E1556. doi: 10.1073/pnas.1403683111

Table 1.

Nine proteins whose abundance in vesicles is influenced by DegP

No. of unique peptides
No. Gene ID Annotation Subcellular localization WT experiment 1 WT experiment 2 degP experiment 1 degP experiment 2
1 VC0930 Matrix biofilm protein, RmbC Extracellular 20 24 0 1
2 VC1888 Biofilm-associated protein 1, Bap1 Extracellular 14 13 0 0
3 VC0928 Matrix biofilm protein, RmbA Extracellular 11 11 1 0
4 VC1950 Biotin sulfoxidereductase Periplasmic 9 7 0 0
5 VCA0140 Spindolin-related Unknown 7 7 0 0
6 VC0157 Alkalineserine protease Extracellular 6 5 0 0
7 VC1280 Hypothetical protein Unknown 5 4 0 0
8 VCA0865 Hemagglutinin/protease Extracellular 5 6 0 0
9 VC0769 Chitinase Unknown 5 3 0 0

The results of comparative proteomic experiments on OMVs of the degP mutant (EC956) and its parental strain revealed nine proteins the abundance of which in vesicles is influenced by DegP. These proteins are classified according to the number of identified unique peptides. The following information is reported for each protein: National Center for Biotechnology Information gene ID, annotation, predicted subcellular localization (PsortB), and unique numbers of identified peptides.

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