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. Author manuscript; available in PMC: 2014 Apr 21.
Published in final edited form as: IEEE/ACM Trans Comput Biol Bioinform. 2013 Mar-Apr;10(2):494–503. doi: 10.1109/TCBB.2013.25

TABLE 1.

Correlation Coefficients and Ratio of Peak Distortion for the Simulated LC-MS Data, before Alignment (Original) and after Alignment by DTW, CPM, BHCR, and BAM (with Fixed Knots and with SSVS)

SNR Original DTW CPM BHCR
BAM
0.1 0.2 0.5 0.1 0.2 0.5 SSVS
0.639
(0.060)
0.918
(0.030)
0.964
(0.017)
0.938
(0.016)
0.960
(0.016)
0.735
(0.079)
0.937
(0.016)
0.962
(0.013)
0.955
(0.031)
0.970
(0.010)
Correlation coeff.

30 0.596
(0.060)
0.880
(0.034)
0.936
(0.019)
0.893
(0.021)
0.907
(0.022)
0.685
(0.073)
0.892
(0.021)
0.911
(0.017)
0.894
(0.038)
0.916
(0.016)

25 0.520
(0.060)
0.823
(0.038)
0.882
(0.021)
0.806
(0.031)
0.812
(0.034)
0.602
(0.068)
0.805
(0.032)
0.819
(0.030)
0.781
(0.057)
0.821
(0.028)

20 0.379
(0.055)
0.710
(0.053)
0.760
(0.040)
0.616
(0.051)
0.612
(0.057)
0.465
(0.065)
0.616
(0.052)
0.627
(0.050)
0.565
(0.064)
0.629
(0.052)

0.168
(0.041)
0.091
(0.047)
0.064
(0.029)
0.079
(0.020)
0.063
(0.019)
0.142
(0.042)
0.079
(0.020)
0.062
(0.018)
0.064
(0.024)
0.054
(0.016)
Peak distortion

30 0.170
(0.044)
0.099
(0.050)
0.072
(0.031)
0.083
(0.021)
0.075
(0.022)
0.147
(0.047)
0.083
(0.021)
0.074
(0.021)
0.081
(0.026)
0.070
(0.020)

25 0.175
(0.044)
0.106
(0.043)
0.082
(0.029)
0.091
(0.024)
0.089
(0.025)
0.159
(0.045)
0.091
(0.024)
0.088
(0.025)
0.099
(0.034)
0.086
(0.022)

20 0.175
(0.042)
0.135
(0.051)
0.105
(0.033)
0.102
(0.027)
0.110
(0.032)
0.170
(0.044)
0.101
(0.026)
0.099
(0.027)
0.128
(0.036)
0.100
(0.027)

Means (standard deviations) are reported for the simulated data based on 500 realizations.