TABLE 1.
Sequences of the oligonucleotides used in this study
Oligonucleotide | Sequence/position | Used in: |
---|---|---|
dnaK-F | 12,136GACCGAATTCATAGTGGAGACG12,157a | PCR amplification of the dnaK gene |
dnaK-R | 14,113CCCGTGTCAGTATAATTACCC14,093 | PCR amplification of the dnaK gene |
sbmA-del-F | 395,804CGGTCATGCGGTTAATACACAG395,825 | PCR amplification of the sbmA gene |
sbmA-del-R | 397,168CCTGACTACTACACCCCGCTAA397,147 | PCR amplification of the sbmA gene |
DB-F | 390,900GCGTTGACCGAATCTACTGGGT390,921 | Mapping of the deletion boundaries in E. coli C600 mutants |
DB-R | 397,995CACCTTTCTCTAACTGACGGCG397,974 | Mapping of the deletion boundaries in E. coli C600 mutants |
DB-R1 | 397,410GGTCAATCTCTTGCCAGGCGAT397,389 | Mapping of the deletion boundaries in E. coli C600 mutants |
sbmA-pET22-F | GCATCACATATGTTTAAGTCTTTTTTCCAb | Cloning of sbmA in E. coli C600 mutants Mut2 to Mut4 |
sbmA-pET22-R | ACATGCGAGCTCGCTCAAGGTATGGGGc | Cloning of sbmA in E. coli C600 mutants Mut2 to Mut4 |
T7 forward | CCCGCGAAATTAATACGACTCACTA | Sequencing of sbmA-complemented and resistant mutants |
T7 reverse | GCTAGTTATTGCTCAGCGG | Sequencing of sbmA-complemented and resistant mutants |
Numbers indicate nucleotide positions with reference to the published genome of E. coli K-12 substrain W3110 (NCBI accession number NC_007779.1).
The NdeI restriction site is underlined.
The SacI restriction site is underlined.