. 2014 May;58(5):2798–2806. doi: 10.1128/AAC.02774-13

TABLE 1.

Genes significantly differentially expressed in the ΔraaS strain versus the WT or ΔraaS_com strain, thus defining the putative RaaS regulon

M. bovis BCG gene	M. tuberculosis homologue	Predicted function	Fold change for ΔraaS strain vs WT or ΔraaS_com strain (assay method)^a				Fold change for ΔraaS_com vs WT (qRT-PCR)
M. bovis BCG gene	M. tuberculosis homologue	Predicted function	WT (MA)	ΔraaS_com (MA)	WT (qRT-PCR)	ΔraaS_com (qRT-PCR)	Fold change for ΔraaS_com vs WT (qRT-PCR)
bcg1278c	rv1218c	ABC transporter	29.56	46.45	48.9	82.79	−1.69
bcg1277c	rv1217c	ABC transporter	21.14	34.86	33.00	62.95	−1.81
bcg1276c	rv1216c	Methyltransferase	8.13	12.10	13.97	25.37	−1.81
bcg1275c	rv1215c	Peptidase	2.50	3.00	2.15	1.95	1.09
drrC	drrC	ABC transporter	2.07	2.09	2.00	1.26	1.59
bcg3553	rv3489	Hypothetical protein	−2.22	3.45	−1.05	−1.22	1.15

Fold change relative to the WT or ΔraaS_com strain was determined by microarray (MA) or qRT-PCR.