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. 2014 May;52(5):1664–1671. doi: 10.1128/JCM.03437-13

TABLE 4.

Characteristics of the six loci used in the M. hyorhinis typing scheme, including genetic variation

Locus Putative gene product Size of sequenced fragment (bp) No. of alleles identified No. of polymorphic nucleotide sites (%) Genetic diversity dN/dSa
dnaA Chromosomal replication initiation protein 435 10 9 (2.1) 0.7512 0.0844
rpoB RNA polymerase β-subunit 496 7 6 (1.2) 0.7980 0.1422
gyrB DNA gyrase subunit B 291 6 4 (1.4) 0.7857 0.0614
gltX Glutamyl-tRNA synthetase 370 7 7 (1.9) 0.5172 0.2352
adk Adenylate kinase 277 4 3 (1.1) 0.5000 0.1309
gmk Guanylate kinase 435 5 4 (0.9) 0.5542 0.8308
a

Ratio of nonsynonymous to synonymous mutations.