TABLE 1.

Primers used for PCR amplification of nine genes

Gene	Primer sequence (5′ to 3′)	Annealing temperature (°C)	Amplicon size (bp)
rpoB	CGTGGAGGCGATCACACCGCAGTT	60	215
	AGTGCGACGGGTGCACGTCGCGGACCT
gyrA	GGTGCTCTATGAAATGTTCG	60	234
	GCTTCGGTGTACCTCATCG
gyrB	CGATGTTCCAGGCGATACTT	60	163
	ATCTTGTGGTAGCGCAGCTT
rrs	GTAATCGCAGATCAGCAACG	60	216
	TTTTCGTGGTGCTCCTTAGAA
tlyA	GTCTCTGGCCGAACTCGAAG	60	1,000
	ATTGTCGCCCAATACTTTTTCTAC
eis promoter	AAATTCGTCGCTGATTCTCG	54	387
	CGCGACGAAACTGAGACC
katG	CATGAACGACGTCGAAACAG	55	270
	CTCTTCGTCAGCTCCCACTC
inhA promoter	AGAAAGGGATCCGTCATGGT	55	340
	GTCACATTCGACGCCAAAC
ahpC promoter	CACTGCTGAACCACTGCTTT	55	196
	CAGTGGCATGACTCTCCTCA