Abbreviations and trivial names of unconjugated, N-acylamidated (with glycine or taurine), and sulfated bile acids used in this study
| Abbreviations | Trivial Names | |
| Saturated bile acids | ||
| 1 | CA | Cholic acid |
| 2 | CDCA | Chenodeoxycholic acid |
| 3 | DCA | Deoxycholic acid |
| 4 | LCA | Lithocholic acid |
| 5 | UDCA | Ursodeoxycholic acid |
| 6 | alloCA | 3α,7α,12α-Trihydroxy-5α-cholan-24-oic acid |
| 7 | alloCDCA | 3α,7α-Dihydroxy-5α-cholan-24-oic acid |
| 8 | isoDCA | 3β,12α-Dihydroxy-5β-cholan-24-oic acid |
| 9 | isoLCA | 3β-Hydroxy-5β-cholan-24-oic acid |
| 10 | allo-isoLCA | 3β-Hydroxy-5α-cholan-24-oic acid |
| 11 | HCA | Hyocholic acid |
| 12 | UCA | Ursocholic acid |
| 13 | HDCA | Hyodeoxycholic acid |
| 14 | MDCA | Murideoxycholic acid |
| Unsaturated bile acids | ||
| 15 | CA-Δ1-3-one | 7α,12α,-Dihydroxy-3-oxo-1-cholen-24-oic acid |
| 16 | CA-Δ4-3-one | 7α,12α,-Dihydroxy-3-oxo-4-cholen-24-oic acid |
| 17 | CA-Δ4,6-3-one | 7α,12α,-Dihydroxy-3-oxo-4,6-choladien-24-oic acid |
| 18 | CDCA-Δ4-3-one | 7α-Hydroxy-3-oxo-4-cholen-24-oic acid |
| 19 | CDCA-Δ4,6-3-one | 7α-Hydroxy-3-oxo-4,6-choladien-24-oic acid |
| 20 | isoCA-Δ5 | 3β,7α,12α-Trihydroxy-5-cholen-24-oic acid |
| 21 | isoCDCA-Δ5 | 3β,7α-Dihydroxy-5-cholen-24-oic acid |
| 22 | isoUDCA-Δ5 | 3β,7β-Dihydroxy-5-cholen-24-oic acid |
| 23 | isoDCA-Δ5 | 3β,12α-Dihydroxy-5-cholen-24-oic acid |
| 24 | isoLCA-Δ5 | 3β-Hydroxy-5-cholen-24-oic acid |
| Hydroxylated bile acids at uncommon position | ||
| 25 | CA-1β-ol | 1β,3α,7α,12α-Tetrahydroxy-5β-cholan 24-oic acid |
| 26 | CA-2β-ol | 2β,3α,7α,12α-Tetrahydroxy-5β-cholan 24-oic acid |
| 27 | isoCA-4β-ol | 3β,4β,7α,12α-Tetrahydroxy-5β-cholan 24-oic acid |
| 28 | CA-6α-ol | 3α,6α,7α,12α-Tetrahydroxy-5β-cholan 24-oic acid |
| 29 | CDCA-1β-ol | 1β,3α,7α-Trihydroxy-5β-cholan 24-oic acid |
| 30 | CDCA-2β-ol | 2β,3α,7α-Trihydroxy-5β-cholan 24-oic acid |
| 31 | CDCA-4β-ol | 3α,4β,7α-Trihydroxy-5β-cholan 24-oic acid |
| 32 | DCA-1β-ol | 1β,3α,12α-Trihydroxy-5β-cholan 24-oic acid |
| Keto-bile acids | ||
| 33 | 7-KetoDCA | 3α,12α-Dihydroxy-7-oxo-5β-cholan-24-oic acid |
| 34 | 7-KetoLCA | 3α-Hydroxy-7-oxo-5β-cholan-24-oic acid |
| 35 | LCA-3-one | 3-Oxo-5β-cholan-24-oic acid |
| Short or long side chain bile acids | ||
| 36 | norDCA | 3β-Hydroxy-5β-cholan-23-oic acid |
| 37 | THChA | 3α,7α,12α-Trihydroxy-5β-cholestan-27-oic acid |
| 38 | DHChA | 3α,7α-Dihydroxy-5β-cholestan-27-oic acid |
| N-acylamidated bile acids | ||
| 39 | GCA | Glycocholic acid |
| 40 | GCDCA | Glycochenodeoxycholic acid |
| 41 | GUDCA | Glycoursodeoxycholic acid |
| 42 | GDCA | Glycodeoxycholic acid |
| 43 | GLCA | Glycolithocholic acid |
| 44 | TCA | Taurocholic acid |
| 45 | TCDCA | Taurochenodeoxycholic acid |
| 46 | TUDCA | Tauroursodeoxycholic acid |
| 47 | TDCA | Taurodeoxycholic acid |
| 48 | TLCA | Taurolithocholic acid |
| Sulfated bile acids | ||
| 49 | CA3S | Cholic acid 3-sulfate |
| 50 | CDCA3S | Chenodeoxycholic acid 3-sulfate |
| 51 | UDCA3S | Ursodeoxycholic acid 3-sulfate |
| 52 | DCA3S | Deoxycholic acid 3-sulfate |
| 53 | LCA3S | Lithocholic acid 3-sulfate |
| Double conjugated bile acids | ||
| 54 | GCA3S | Glycocholic acid 3-sulfate |
| 55 | GCDCA3S | Glycochenodeoxycholic acid 3-sulfate |
| 56 | GUDCA3S | Glycoursodeoxycholic acid 3-sulfate |
| 57 | GDCA3S | Glycodeoxycholic acid 3-sulfate |
| 58 | GLCA3S | Glycolithocholic acid 3-sulfate |
| 59 | TCA3S | Taurocholic acid 3-sulfate |
| 60 | TCDCA3S | Taurochenodeoxycholic acid 3-sulfate |
| 61 | TUDCA3S | Tauroursodeoxycholic acid 3-sulfate |
| 62 | TDCA3S | Taurodeoxycholic acid 3-sulfate |
| 63 | TLCA3S | Taurolithocholic acid 3-sulfate |