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. 2014 Apr 22;9(4):e95349. doi: 10.1371/journal.pone.0095349

Figure 2. Schematic diagram demonstrating differences in Group 2 CJIE4 prophage DNA sequences.

Figure 2

Strains carried the alternate large indel containing ORFs 6-10. The diagram includes prophages investigated in this work (see Materials and Methods) plus those obtained from NCBI databases. The question mark in the 2548 indicates that the fact that no sequence was found for this region may indicate either that there was a problem with the search parameters used to detect contigs encoding proteins homologous to those in other CJIE4 variants or that there was a horizontal gene transfer replacing the region with a different gene repertoire. The colors used to identify putative protein functions were the same as in Fig. 1. Sizes of genes are approximate, and any non-coding sequence between genes has not been shown to conserve space.