Table 3. Detection of proteins associated with the CJIE4 prophage after growth on Mueller-Hinton agar in iTRAQ labelling experiments.
Identified Protein | Accession Number | 00-2425 | 00-6200 | 00-1512 | 00-1597 | 00-0949 |
site-specific recombinase, phage integrase family CJE1418 | gi|384443628 | + | + | + | + | + |
hypothetical protein CJE1420, putative excisonase | gi|384443630 | - | + | + | + | + |
emm-like protein CJE1422 | gi|384443632 | - | + | + | ± | + |
hypothetical protein CJE1429 | gi|57238165, gi|384443638 | + | + | + | + | + |
RloG protein, putative CJE1430 | gi|384443639 | + | + | + | + | + |
hypothetical protein CJE1432 | gi|57238168, gi|384443641 | + | + | + | + | + |
hypothetical protein, phage repressor protein ORF6 | gi|384443648 | - | - | - | + | + |
hypothetical protein ORF7 | gi|384443649 | - | - | - | + | + |
exonuclease, DNA polymerase III epsilon subunit ORF8 | gi|384443650 | - | - | - | + | + |
hypothetical protein ORF9 | gi|384443651 | - | - | - | + | + |
KAP family P-loop domain protein ORF10 | gi|384443652 | - | - | - | + | + |
hypothetical protein CJE1439 | gi|57238175 | + | + | + | - | - |
signal peptidase I, phage repressor protein CJE1440 | gi|57238176 | + | + | + | - | - |
DNA/RNA non-specific endonuclease CJE1441 | gi|57238723 | + | + | + | - | - |
hypothetical protein CJE1444 | gi|384443653 | - | - | + | - | + |
hypothetical protein CJE1447 | gi|384443655 | - | + | + | + | ++ |
hypothetical protein CJE1452 | gi|57238311, gi|384443660 | + | + | + | + | ++ |
major capsid protein, HK97 family CJE1458 | gi|384443665 | + | + | ± | + | ++ |
DNA repair protein rad2, CJE1465 | gi|384443671 | - | + | + | + | ++ |
hypothetical protein CJE1466 | gi|57238325, gi|384443672 | + | + | + | + | + |
toxin-antitoxin protein MazF, CJE1470 | gi|57238328, gi|384443676 | + | + | + | + | + |
Expression of proteins from C. jejuni isolate 00-2425 was assessed in previous work [10]; -, not detected.