Table 4. Specific amino acids in five trichome regulatory genes within the Brassicaceae.
*Consensus position | A. thaliana hairy | B. rapa AA hairy | B. napus AC glabrous | B.oleracea CC glabrous | B. villosa CC hairy | |
GL1 | 137* | Pro | Pro | Pro | Pro | Thr |
154* | Gln | Gln | Gln | Gln | Glu | |
202* | Asn | Asn | Asn | Asn | Asp | |
223(1) 223(2) | Leu NA | Phe Leu | Ser NA | Ser NA | Phe NA | |
GL2 | 273(1) 273(2) | Glu NA | Gln NA | His Gln | His NA | Gln NA |
282* | Tyr | Tyr | Tyr | Tyr | Phe | |
287* | Ala | Ala | Ala | Ala | Ser | |
439-(1) 439-(2) | Ala | Ala | Val | Val | Ala | |
EGL3 | 171(1) * 171(2) | Val NA | Val Val | ND ND | Val Val | Ala Val |
552* | Leu | Leu | ND | Leu | Val | |
TTG1 | 4* | Ser | Ser | Ser | Ser | Ala |
TRY | 154(1) * 154(2) * 154(3) * | Arg NA NA | Arg NIL NIL | Arg NA NA | Arg Arg Arg | Ser Ser NA |
*Selected positions in the aligned consensus amino acid sequence (CAA) were selected from Figure S1 if they distinguished hairy from glabrous germplasm (dark arrows in Fig. S1) or were unique to B. villosa (*red arrows in Fig. S1). ND, not determined (sequence not available). NIL, missing amino acid. NA, not applicable. Note: Multiple gene copies are only indicated if an amino acid differed between the copies.