Table A6.

Identification of the fungal OTUs retrieved from early and late incubated eggs.

			Affiliation1(%)
OTU identity	Affiliated sequences (%)	Sample origin	Phylum	Class	Closest hit2	Accession number	Similarity (%)3
1	12.3	Early incubation	Ascomycota	Dothideomycetes	Cladosporium cladosporioides	JN650537	100
2	1.5	Early incubation	Basidiomycota	Microbotryomycetes	Rhodotorula dairenensis	JN246550	100
3	3.1	Early incubation	Ascomycota	Dothideomycetes	Cladosporium langeronii	HQ115727	100
4	12.3	Early incubation	Ascomycota	Leotiomycetes	Uncultured Helotiales	JQ991733	96
5	16.9	Early incubation	Ascomycota	Dothideomycetes	Davidiella tassiana	AM159622	100
6	7.7	Early incubation	Basidiomycota	Cystobasidiomycetes	Sporobolomyces foliicola	AF444521	97
7	10.8	Early incubation	Basidiomycota	Agaricomycetes	Psilocybe spp.	DQ002870	100
8	9.2	Early incubation	Ascomycota	Leotiomycetes	Sclerotinia sclerotiorum	AB693927	100
9	3.1	Early incubation	Ascomycota	Dothideomycetes	Phoma herbarum	GU004222	100
10	3.1	Early incubation	Basidiomycota	Cystobasidiomycetes	Sporobolomyces coprosmae	AM160645	100
11	3.1	Early incubation	Ascomycota	Dothideomycetes	Phoma spp.	FJ430739	99
12	7.7	Early incubation	Basidiomycota	Tremellomycetes	Cryptococcus spp.	AM160648	100
13	1.5	Early incubation	Basidiomycota	Microbotryomycetes	Sporobolomyces lactosus	AB038132	99
14	4.6	Early incubation	Ascomycota	Leotiomycetes	Tetracladium marchalianum	FJ205463	99
15	3.1	Early incubation	Basidiomycota	Agaricomycetes	Bjerkandera adusta	JF340266	99
1	1.2	Late incubation	Ascomycota	Dothideomycetes	Cladosporium cladosporioides	JN650537	100
5	12.9	Late incubation	Ascomycota	Dothideomycetes	Davidiella tassiana	AM159622	100
8	5.9	Late incubation	Ascomycota	Leotiomycetes	Sclerotinia sclerotiorum	AB693927	100
16	35.3	Late incubation	Ascomycota	Leotiomycetes	Lachnum sp.	AB481283	93
17	31.8	Late incubation	Ascomycota	Saccharomycetes	Debaryomyces hansenii	HE660057	100
18	2.4	Late incubation	Ascomycota	Leotiomycetes	Blumeria graminis	AB273567	99
19	10.6	Late incubation	Basidiomycota	Exobasidiomycetes	Malassezia globosa	AY743630	97

¹The taxonomic affiliation is presented at the phyla, class, and genus/species levels and was based on a single representative sequence from each operational taxonomic unit (OTU) clustered at 98% of nucleotide identity.

²The phylogenetic classification was based on a single representative sequence from each OTU clustered at 98% of nucleotide identity.

³The representative sequence was compared with fungal database, allowing establishing similarity shared (in percentage) with a reference sequence.