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. 2013 Nov 28;38(5):1105–1111. doi: 10.1007/s00264-013-2194-9

Table 1.

Sequences of oligonucleotide primers and probes used for real-time polymerase chain reaction (PCR)

Gene (bovine) Symbol Forward primer (5′–3′) Reverse primer (5′–3′) Probe (5′FAM/3′TAMRA)
Collagen 1A2 COL1A2 TGC AGT AAC TTC GTG CCT AGC A CGC GTG GTC CTC TAT CTC CA CAT GCC AAT CCT TAC AAG AGGRECAN CAA CTG C
Collagen 2A1 COL2A1 AAG AAA CAC ATC TGG TTT GGA GAA A TGG GAG CCA GGT TGT CAT C CAA CGG TGG CTT CCA CTT CAG CTA TGG
Aggrecan ACAN CCA ACG AAA CCT ATG ACG TGT ACT GCA CTC GTT GGC TGC CTC ATG TTG CAT AGA AGA CCT CGC CCT CCA T
Cartilage oligomeric matrix protein COMP CCA GAA GAA CGA CGACCA GAA TCT GAT CTG AGT TGG GCA CCT T ACG GCG ACC GGA TCC GCA A
Proteoglycan-4 (SZP) PRG-4 GAG CAG ACC TGA ATC CGT GTA TT GGT GGG TTC CTG TTT GTA AGT GTA CTG AAC GCT GCC ACC TCT CTT GAA A