A set of G. australe-specific SSR markers were used to identify individual alien chromosomes of G. australe in G. hirsutum. a–m The G. australe-specific amplicons were obtained using 13 individual chromosome-specific primer pairs for markers; NAU5138, NAU6692, NAU805, NAU2120, Cgr5510, dPL0811, dPL0048, NAU6616, NAU3763, NAU4973, NAU2141, dPL0379, and BNL193. The chromosomes correspond to D1–D13 in cultivated tetraploid cotton. P1
G. hirsutum,
P2
G. australe,
F
1 the hexaploid of G. hirsutum and G. australe; 1–6 and 8–12 show that each of these plants possesses a single different individual chromosome from G. australe, corresponding to 1Ga to 6Ga, and 8Ga to 12Ga, but not 7Ga or 13Ga. M molecular size marker (50 bp ladder). Arrows (red) indicate chromosome-specific markers for G. australe