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. 2014 Apr 24;9(4):e95969. doi: 10.1371/journal.pone.0095969

Table 2. Comparative analysis of the substitutions in RNA-coding genes inferred in the full set of 30 sequences.

Position Gene Allelic variants Homologous pos. in rCRS Variants in MITOMAP Occurrences in GB
165 12S-rRNA T/C 743C not present
177 12S-rRNA T/del amb. align.1
178 12S-rRNA T/del amb. align.1
180 12S-rRNA G/T amb. align.1
181 12S-rRNA A/T amb. align.1
196 12S-rRNA T/C 773T T-C 1
205 12S-rRNA T/C 782A not present
213 12S-rRNA T/C 790A not present
605 12S-rRNA T/C 1187T T-C 18
944 12S-rRNA T/C 1520T T-C 13
1026 12S-rRNA T/C 1601C C-T 2
1114 16S-rRNA T/C amb. align.1
1111-20 16S-rRNA C10/C11
1192 16S-rRNA T/C 1764C C-T 1
1238/39 16S-rRNA A/del amb. align.1
1369 16S-rRNA T/C amb. align.1
1671 16S-rRNA A/G 2241A not present
1850 16S-rRNA T/C 2417C C-G 4
2120 16S-rRNA T/C 2686G not present
2190 16S-rRNA A/G 2756C C-A, C-T 1, 5
2208 16S-rRNA T/C 2774C not present
2619 16S-rRNA T/C 3184C C-T 1
3771 tRNA-Gln T/C 4335C C-T 9
3892 tRNA-Met T/C 4454T T-A, T-C 90, 80
6894 tRNA-Ser (UCN) T/C 7468C C-T 5
7723 tRNA-Lys A/G 8315A A-G 1
9827 tRNA-Arg T/C 10421C C-T 1
9860 tRNA-Arg T/C 10454T T-C 59
9863 tRNA-Arg A/G amb. align.1
11560-7 tRNA-His A8/A9 amb. align.1
11569 tRNA-His A/G 12160A not present
11624 tRNA-Ser (AGY) T/C 12214C not present
11691 tRNA-Leu(CUN) A/G 12279A A-T 1
11702 tRNA-Leu(CUN) A/G 12290A A-G 2
1

Ambiguous alignment.