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. Author manuscript; available in PMC: 2014 Nov 1.
Published in final edited form as: Res Microbiol. 2013 Aug 28;164(9):891–893. doi: 10.1016/j.resmic.2013.08.004

Table 1. ORF content of hotspot 4 in ICEVchHai2.

Annotated genes refer to ICEVchHai2 in V. cholerae HC-1A2 (GenBank Accession No. AJRO01000008.1). Blast2Go was used to perform functional annotation with Gene Ontology (GO) and InterProScan.

Gene Putative role Gene Length (nt) GO terms
VCHC1A2_1617 Transposase 327 Transposition, DNA-mediated
VCHC1A2_1618 Polyribonucleotide nucleotidyltransferase 141 Transposition, DNA-mediated
VCHC1A2_1619 trp Repressor family protein 951 Nucleic acid binding
VCHC1A2_1620 Transposase dde domain protein 759 Transposition, DNA-mediated
VCHC1A2_1621 Hypothetical protein VCHC1A2_1621 126 -
VCHC1A2_1622 smf family protein 930 DNA-mediated transformation
VCHC1A2_1623 ATP-dependent DNA helicase 4677 DNA recombination
VCHC1A2_1624 Hypothetical protein VCHC59A1_0788 489 -
VCHC1A2_1625 Hypothetical protein VCHC1A2_1625 117 -
VCHC1A2_1626 Endonuclease-1 678 Deoxyribonuclease I activity