Table 5.

Association of the top SNPs with sdLDL-C

sdLDL-C
SNP	Location	Chromosome	# Sign SNPs	Coded Allele	Allele Frequency	N	Beta	SEBeta	P	Gene
rs964184	11q23.3	11	12	C	0.8588	6979	−5.70008	0.511384	7.46×10−29	APOA5/A4/C3/A1
rs4420638	19q13.32	19	6	A	0.8264	6979	−5.45295	0.490271	9.77×10−29	APOE/C1/C4/C2
rs2075650	19q13.32	19	3	A	0.8611	6979	−7.15912	0.748784	1.17×10−21	TOMM40
rs660240	1p13.3	1	10	C	0.7873	6979	3.45306	0.432418	1.40×10−15	PSRC1/CELSR2/SORT1
rs6589564	11q23.3	11	18	C	0.0723	6979	5.53037	0.700672	2.95×10−15	BUD13
rs2075290	11q23.3	11	5	C	0.0716	6979	5.48955	0.701319	4.98×10−15	ZNF259
rs2980853	8q24.13	8	38	A	0.5315	6979	2.63962	0.353669	8.42×10−14	TRIB1
rs1260326	2p23.3	2	3	C	0.5856	6979	−2.60009	0.366214	1.25×10−12	GCKR
rs7254892	19q13.32	19	1	A	0.0534	6979	−10.9757	1.78507	7.82×10−10	PVRL2
rs562338	2p23–2p24	2	24	A	0.1811	6979	−2.65678	0.464554	1.07×10−08	APOB
rs508487	11q23-q24	11	1	C	0.9402	6979	−4.95643	0.868883	1.17×10−08	PCSK7
rs4803760	19p13.2	19	1	C	0.7692	6979	2.73614	0.49648	3.57×10−08	BCAM
rs1178977	7q11.23	7	3	A	0.8000	6979	2.55226	0.466442	4.46×10−08	MLXIPL
rs6976930	7q11.23	7	2	A	0.2001	6979	−2.54050	0.464764	4.60×10−08	BAZ1B