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. Author manuscript; available in PMC: 2014 Apr 25.
Published in final edited form as: J Bone Marrow Res. 2013 May 23;1:122. doi: 10.4172/2329-8820.1000122

Figure 1. Gene expression changes in invasive hMSCs.

Figure 1

A) Microscopic images (20X) of cells invaded toward SCM after 24 hours using either control inserts or inserts containing Matrigel. Cells were staining with the Diffi-Quick Staining kit.

B) Heat Maps demonstrating increased (red) or decreased (green) expression of a select number genes from the invasive compared to non-invasive cells. Samples were hybridized to an Agilent whole genome gene expression array following manufacturer’s directions. Arrays were scanned using a GenePix 4000B scanner (Molecular Devices, Sunnyvale, CA) and analyzed using Cluster and Treeview offered by Michael B. Eisen as freeware (http://rana.lbl.gov/EisenSoftware.htm). The complete list of genes whose expression changed ≥1.8- or ≤1.8-fold is available in Supplemental Table S1.

C)A select number of up-regulated genes were verified using qRT-PCR for increased expression in the invasive cells. Gray bars represent the non-invasive cell expression normalized to 1 and black bars are relative fold-induction of mRNA from invasive cells. Fold induction was calculated using the Delta-Delta CT method where the non-invasive cells were set at 1.0 as the control, and 18S rRNA was used as a loading control. Data is shown as transformed log2. A Twoway ANOVA with a Bonferroni post-test was performed to compare groups and * represents a p-value of < 0.05 comparing invasive to non-invasive cells.