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. 2014 Mar 20;14:52. doi: 10.1186/1471-2148-14-52

Table 3.

FcLM Results

Dataset Possible unambiguous topologies No. of drawn quartets Support T1 [%] 1,2 | 3,4 Support T2 [%] 1,3 | 2,4 Support T3 [%] 1,4 | 2,3
Dataset 1 (complete dataset)
T1: Hymenoptera,outgroup taxa | Mecopterida, Neuropteroidea
142,800
83
8
8
T2: Hymenoptera, Mecopterida | outgroup taxa, Neuropteroidea
T3: Hymenoptera, Neuropteroidea | outgroup taxa, Mecopterida
Dataset 2
T1: Neuropterida, Mecopterida | Coleopterida, Hymenoptera
20,160
8
80
11
T2: Neuropterida, Coleopterida | Mecopterida, Hymenoptera
T3: Neuropterida, Hymenoptera | Mecopterida, Coleopterida
Dataset 3
T1: Raphidioptera, Corydalidae | Sialidae, Neuroptera
1
0
0
100
T2: Raphidioptera, Sialidae | Corydalidae, Neuroptera
T3: Raphidioptera, Neuroptera | Corydalidae, Sialidae
Dataset 4
T1: Raphidioptera, Megaloptera | Neuroptera, remaining holometabolans
134
25
1
72
T2: Raphidioptera, Neuroptera | Megaloptera, remaining holometabolans
T3: Raphidioptera, remaining holometabolans | Megaloptera, Neuroptera
Dataset 5
T1: Neuropterida,Strepsiptera | Coleoptera,remaining holometabolans
1,220
6 (8)
55 (53)
38 (38)
T2: Neuropterida, Coleoptera | Strepsiptera,remaining holometabolans
T3: Neuropterida,remaining holometabolans | Strepsiptera, Coleoptera
Dataset 6a
T1: Antliophora, Amphiesmenoptera | Coleopterida, remaining holometabolans
80,640
80
14
5
T2: Antliophora, Coleopterida | Amphiesmenoptera, remaining holometabolans
T3: Antliophora, remaining holometabolans | Amphiesmenoptera, Coleopterida
Dataset 6b
T1: Antliophora, Amphiesmenoptera | Coleopterida, remaining holometabolans
57,600
79
15
5
T2: Antliophora, Coleopterida | Amphiesmenoptera, remaining holometabolans
T3: Antliophora, remaining holometabolans | Amphiesmenoptera, Coleopterida
 
Dataset 7 T1: Diptera, Siphonaptera | Mecoptera, remaining holometabolans
1,034 0 0 100
T2: Diptera, Mecoptera | Siphonaptera, remaining holometabolans
T3: Diptera, remaining holometabolans | Siphonaptera, Mecoptera

For the four groups (clusters) that were selected for each of the seven datasets, three unambiguous topologies are possible (see Additional file 4, Chapter 3, and Additional file 3: Figure S16). For details which species are included in the groups for each dataset see Additional file 12. The number of drawn quartets is the product of the numbers of species in each group. In bold print: Topology that gained the highest support (support [%]: relative amount of quartets which show predominant support for either T1, T2 or T3). Results of partitioned analyses of dataset 5 in parentheses.