Table 1.
Selected list of top 56 proteins identified with more than twofold change in TCs versusFBs at 5th day sorted by iTRAQ ratio and presenting the number of peptides hits
| Accession | Protein name | Peptides (95%) | %Cov (95) | iTRAQ ratio FBs:TCs | Fold enrichment in TCs | P |
|---|---|---|---|---|---|---|
| MYH14_HUMAN | Myosin-14 | 18 | 7.67 | 0.064 | 15.72 | 0.025 |
| SODM_HUMAN | Superoxide dismutase [Mn], mitochondrial | 10 | 35.14 | 0.104 | 9.6 | 0.000 |
| ALDH2_HUMAN | Aldehyde dehydrogenase, mitochondrial | 5 | 10.06 | 0.164 | 6.1 | 0.000 |
| PTGIS_HUMAN | Prostacyclin synthase | 7 | 15.80 | 0.199 | 5.03 | 0.005 |
| APOH_HUMAN | Beta-2-glycoprotein 1 | 2 | 4.35 | 0.210 | 4.75 | 0.041 |
| PPBT_HUMAN | Alkaline phosphatase, tissue-non-specific isozyme | 2 | 4.01 | 0.260 | 3.85 | 0.043 |
| PEPL_HUMAN | Periplakin | 4 | 2.85 | 0.284 | 3.52 | 0.032 |
| AL1B1_HUMAN | Aldehyde dehydrogenase X, mitochondrial | 5 | 13.93 | 0.313 | 3.2 | 0.024 |
| THIM_HUMAN | 3-ketoacyl-CoA thiolase, mitochondrial | 12 | 33.50 | 0.329 | 3.04 | 0.036 |
| KAD2_HUMAN | Adenylate kinase 2, mitochondrial | 8 | 41.42 | 0.336 | 2.97 | 0.001 |
| PLOD2_HUMAN | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 15 | 22.39 | 0.367 | 2.72 | 0.000 |
| AT1A1_HUMAN | Sodium/potassium-transporting ATPase subunit α-1 | 17 | 18.77 | 0.375 | 2.67 | 0.000 |
| COX5B_HUMAN | Cytochrome c oxidase subunit 5B, mitochondrial | 4 | 34.11 | 0.380 | 2.63 | 0.006 |
| DNJC3_HUMAN | DnaJ homologue subfamily C member 3 | 2 | 3.77 | 0.392 | 2.55 | 0.024 |
| PRDX3_HUMAN | Thioredoxin-dependent peroxide reductase, mitochondrial | 6 | 23.83 | 0.395 | 2.53 | 0.028 |
| SUCA_HUMAN | Succinyl-CoA ligase [GDP-forming] subunit α, mitochondrial | 5 | 17.63 | 0.399 | 2.51 | 0.008 |
| COX5A_HUMAN | Cytochrome c oxidase subunit 5A, mitochondrial | 6 | 58.67 | 0.408 | 2.45 | 0.000 |
| CH10_HUMAN | 10 kD heat shock protein, mitochondrial | 12 | 73.53 | 0.409 | 2.44 | 0.003 |
| CH60_HUMAN | 60 kD heat shock protein, mitochondrial | 60 | 62.30 | 0.414 | 2.42 | 0.003 |
| SQRD_HUMAN | Sulphide:quinone oxidoreductase, mitochondrial | 9 | 19.78 | 0.421 | 2.38 | 0.000 |
| ERP29_HUMAN | Endoplasmic reticulum resident protein 29 | 7 | 28.74 | 0.422 | 2.37 | 0.001 |
| K2C1_HUMAN | Keratin, type II cytoskeletal 1 | 12 | 15.06 | 0.435 | 2.3 | 0.004 |
| ERP44_HUMAN | Endoplasmic reticulum resident protein 44 | 4 | 8.13 | 0.442 | 2.26 | 0.002 |
| CATA_HUMAN | Catalase | 5 | 12.90 | 0.460 | 2.18 | 0.007 |
| ETFB_HUMAN | Electron transfer flavoprotein subunit β | 6 | 25.88 | 0.473 | 2.11 | 0.008 |
| SSBP_HUMAN | Single-stranded DNA-binding protein, mitochondrial | 6 | 50.68 | 0.476 | 2.1 | 0.028 |
| NLTP_HUMAN | Non-specific lipid-transfer protein | 9 | 12.43 | 0.477 | 2.1 | 0.010 |
| PDIA3_HUMAN | Protein disulphide-isomerase A3 | 45 | 52.48 | 0.480 | 2.08 | 0.019 |
| IDHP_HUMAN | Isocitrate dehydrogenase [NADP], mitochondrial | 5 | 9.29 | 0.492 | 2.03 | 0.000 |
| SPTB2_HUMAN | Spectrin β chain, brain 1 | 43 | 19.42 | 0.493 | 2.03 | 0.000 |
| RT36_HUMAN | 28S ribosomal protein S36, mitochondrial | 2 | 30.10 | 0.494 | 2.02 | 0.036 |
| THIO_HUMAN | Thioredoxin | 5 | 51.43 | 2.006 | 2.01 | 0.008 |
| KPYM_HUMAN | Pyruvate kinase isozymes M1/M2 | 36 | 67.23 | 2.035 | 2.03 | 0.016 |
| CD166_HUMAN | CD166 antigen | 4 | 11.32 | 2.055 | 2.06 | 0.006 |
| WDR1_HUMAN | WD repeat-containing protein 1 | 10 | 18.15 | 2.061 | 2.06 | 0.001 |
| RS2_HUMAN | 40S ribosomal protein S2 | 10 | 31.06 | 2.088 | 2.09 | 0.000 |
| ACLY_HUMAN | ATP-citrate synthase | 11 | 11.08 | 2.089 | 2.09 | 0.000 |
| FLNC_HUMAN | Filamin-C | 73 | 32.40 | 2.160 | 2.16 | 0.000 |
| GSTO1_HUMAN | Glutathione S-transferase omega-1 | 2 | 9.54 | 2.181 | 2.18 | 0.028 |
| VAT1_HUMAN | Synaptic vesicle membrane protein VAT-1 homologue | 12 | 31.81 | 2.183 | 2.18 | 0.015 |
| CRTAP_HUMAN | Cartilage-associated protein | 2 | 3.74 | 2.273 | 2.27 | 0.049 |
| SYVC_HUMAN | Valyl-tRNA synthetase | 3 | 2.37 | 2.276 | 2.28 | 0.010 |
| VIME_HUMAN | Vimentin | 200 | 83.69 | 2.603 | 2.6 | 0.000 |
| 5NTD_HUMAN | 5′-nucleotidase | 6 | 14.81 | 2.603 | 2.6 | 0.000 |
| NEST_HUMAN | Nestin | 22 | 16.84 | 2.615 | 2.62 | 0.006 |
| PLIN3_HUMAN | Perilipin-3 | 9 | 26.50 | 2.625 | 2.63 | 0.000 |
| ANXA6_HUMAN | Annexin A6 | 21 | 31.35 | 2.714 | 2.71 | 0.005 |
| SERA_HUMAN | D-3-phosphoglycerate dehydrogenase | 4 | 8.07 | 2.773 | 2.77 | 0.017 |
| G3P_HUMAN | Glyceraldehyde-3-phosphate dehydrogenase | 42 | 64.48 | 2.819 | 2.82 | 0.001 |
| S10AD_HUMAN | Protein S100-A13 | 5 | 44.90 | 2.823 | 2.82 | 0.000 |
| RL15_HUMAN | 60S ribosomal protein L15 | 2 | 7.84 | 3.130 | 3.13 | 0.006 |
| LEG1_HUMAN | Galectin-1 | 27 | 91.11 | 3.133 | 3.13 | 0.000 |
| GDIR1_HUMAN | Rho GDP-dissociation inhibitor 1 | 4 | 18.14 | 3.241 | 3.24 | 0.001 |
| FSCN1_HUMAN | Fascin | 6 | 16.63 | 3.255 | 3.25 | 0.004 |
| SCRN1_HUMAN | Secernin-1 | 2 | 5.80 | 3.734 | 3.73 | 0.019 |
| CO6A3_HUMAN | Collagen α-3(VI) chain | 41 | 16.53 | 4.707 | 4.71 | 0.000 |