Table 3.

Distribution of SNPs used for genotyping and in the final analysis

Chromosome	Initial number of SNPs	Final number of SNPs used in the analysis	Map length (cM) 1
1	930	548	483.9
2	710	410	312.4
3	530	268	268.7
4	431	116	202.4
5	286	134	158.3
6	167	89	110.4
7	173	106	113.1
8	133	77	91.6
9	239	120	89.1
10	208	114	89.7
11	211	140	69.2
12	195	116	73.9
13	182	110	58.9
14	159	101	67.5
15	130	71	55.2
16	4	3	0
17	108	60	53.4
18	109	56	52.2
19	96	51	52.6
20	141	76	52.2
21	94	58	52.7
22	50	35	58.9
23	75	42	45.2
24	85	47	47.6
25	21	15	57.4
26	71	60	46.9
27	60	19	52.6
28	56	43	51.6
LGE22C19	12	3	53.2
Z	326	291	231.5

¹Map length (in cM) of sex-averaged maps according to Groenen et al. [26].