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. 2014 Feb;143(2):145–156. doi: 10.1085/jgp.201311103

Figure 1.

Figure 1.

The register of S4 is not ambiguous. (A) Positional posterior probability of the Needleman–Wunsch optimal pairwise alignment of Kv1.2 and human Hv1. (B) Positional posterior probabilities of alignments sampled from the pair HMMs underlying the ppAlign algorithm. Each alignment represents a different possible register for the S4 helix of Hv1 with respect to Kv1.2.